*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2004-OT328xDumont
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2004-OT328xDumont_4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2004-OT328xDumont [ View Map Set Info ]
Map Name: Oat-2004-OT328xDumont_4
Map Start: 0 cM
Map Stop: 7 cM
Features by Type:
2 locus
2 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 2 of 2.
Oat - Oat-2004-OT328xDumont - Oat-2004-OT328xDumont_4
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Pc38 locus 0 Diploid oat - Oat-1980-Pc62xPc38 - Oat-1980-Pc62xPc38_1 Pc38 locus 0 (cM) Automated name-based View Maps
Diploid oat - Oat-1980-Pc63xPc38 - Oat-1980-Pc63xPc38_1 Pc38 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2004-P48xP38 - Oat-2004-P48xP38_1 Pc38 locus 4 () Automated name-based View Maps
cdo1385c locus 7 Oat - Oat-2001-KxO - Oat-2001-KxO_7-10-28 CDO1385C locus 60 (cM) Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO7_10_28 cdo1385c locus 73.41 (cM) Automated name-based View Maps
Oat - Oat-2006-KxO-RGA - Oat-2006-KxO-RGA_KO7_10_28 cdo1385c locus 17.5 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_23 cdo1385c locus 19 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-7_10_28 cdo1385c locus 78.9 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-33 CDO1385C locus 92.8 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_7_10_28 CDO1385C locus 71 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg33 CDO1385C locus 92.8 () Automated name-based View Maps

GrainGenes is a product of the US Department of Agriculture.