*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2004-OT328xDumont
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2004-OT328xDumont_2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2004-OT328xDumont [ View Map Set Info ]
Map Name: Oat-2004-OT328xDumont_2
Map Start: 0 cM
Map Stop: 14.9 cM
Features by Type:
9 locus
9 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 9 of 9.
Oat - Oat-2004-OT328xDumont - Oat-2004-OT328xDumont_2
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
56.6 locus 0 No other positions
mog12B locus 0 Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 MOG12B locus 153.75 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_3-38 MOG12B locus 153.75 (cM) Automated name-based View Maps
pg-13 locus 10.7 Oat - Oat-1992-ROxpg13 - Oat-1992-ROxpg13_1 pg-13 locus 0 (cM) Automated name-based View Maps
Oat - Oat-1970-490xRod - Oat-1970-490xRod_1 pg-13 locus 0 (cM) Automated name-based View Maps
Oat - Oat-1996-OT328xDumont - Oat-1996-OT328xDumont_3 pg-13 locus 10.7 (cM) Automated name-based View Maps
cdo1242B locus 10.7 Oat - Oat-1996-OT328xDumont - Oat-1996-OT328xDumont_3 cdo1242B locus 14.2 (cM) Automated name-based View Maps
cdo346a locus 10.7 Oat - Oat-2009-KxO - Oat-2009-KxO_1_3_38_break CDO346A locus 0 (cM) Automated name-based View Maps
Oat - Oat-2001-KxM - Oat-2001-KxM_3 cdo346a locus 23 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 CDO346A locus 67.7 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 CDO346A locus 67.7 () Automated name-based View Maps
Maize - Maize, TxCM - Zea-Ahn-8 CDO346a locus 72.75 () Automated name-based View Maps
Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_3-38 CDO346A locus 133.75 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-3+38 CDO346a locus 73.3 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 CDO346A locus 133.75 (cM) Automated name-based View Maps
Oat - Oat-2001-KxM-QTL - Oat-2001-KxM-QTL_3 CDO346A locus 23 (cM) Automated name-based View Maps
cdo393a locus 14.2 Oat - Oat, KxO, 2003 - Oat-KxO/2003-3+38 cdo393a locus 72.9 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 CDO393A locus 67.7 () Automated name-based View Maps
Oat - Oat, OxT - Oat-OxT-4 cdo393a locus 39.2 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 CDO393A locus 153.75 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 CDO393A locus 67.7 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_1_3_38_break CDO393A locus 0 (cM) Automated name-based View Maps
bcd1562a locus 14.2 Oat - Oat-2001-KxM-QTL - Oat-2001-KxM-QTL_3 BCD1562A locus 24 (cM) Automated name-based View Maps
Oat - Oat-2001-KxM - Oat-2001-KxM_3 bcd1562a locus 24 () Automated name-based View Maps
cdo1420a locus 14.2 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 CDO1420A locus 67.7 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 CDO1420A locus 133.75 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 CDO1420A locus 67.7 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-3+38 cdo1420a locus 73.7 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_1_3_38_break CDO1420A locus 0 (cM) Automated name-based View Maps
cdo270b locus 14.9 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 CDO270B locus 67.7 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 CDO270B locus 67.7 () Automated name-based View Maps
Oat - Oat-2001-KxM-QTL - Oat-2001-KxM-QTL_3 CDO270B locus 26 (cM) Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_1_3_38_break CDO270B locus 0 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 CDO270B locus 133.75 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_3-38 CDO270B locus 133.75 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-3+38 cdo270b locus 73.7 () Automated name-based View Maps

GrainGenes is a product of the US Department of Agriculture.