*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2004-OT328xDumont
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2004-OT328xDumont_1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2004-OT328xDumont [ View Map Set Info ]
Map Name: Oat-2004-OT328xDumont_1
Map Start: 0 cM
Map Stop: 2.3 cM
Features by Type:
7 locus
7 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 7 of 7.
Oat - Oat-2004-OT328xDumont - Oat-2004-OT328xDumont_1
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
cdo1385f locus 0 Oat - Oat, KxO, 2003 - Oat-KxO/2003-4_12 cdo1385f locus 12.4 () Automated name-based View Maps
Oat - Oat-2004-TxM - Oat-2004-TxM_3 cdo1385f locus 3 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_4-12 CDO1385F locus 11.25 (cM) Automated name-based View Maps
Oat - Oat-2010-MAMA - Oat-2010-MAMA-OTDu_1 cdo1385f locus 3 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg19 CDO1385F locus 78.5 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_4_12_13 CDO1385F locus 127 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-19 CDO1385F locus 78.5 () Automated name-based View Maps
acor458A locus 1.2 No other positions
Avn-B2 locus 1.2 Oat - Oat-2010-MAMA - Oat-2010-MAMA-OTDu_1 Avn-B2 locus 14 (cM) Automated name-based View Maps
Oat - Oat-1996-OT328xDumont - Oat-1996-OT328xDumont_4 Avn-B2 locus 1.2 (cM) Automated name-based View Maps
pg9(PcX) locus 2.3 Oat - Oat-1996-ROxpg9 - Oat-1996-ROxpg9_4 pg9(PcX) locus 2.7 (cM) Automated name-based View Maps
Oat - Oat-1996-OT328xDumont - Oat-1996-OT328xDumont_4 pg9(PcX) locus 2.3 (cM) Automated name-based View Maps
umn101a locus 2.3 Oat - Oat, OxT - Oat-OxT-8 umn101a locus 23 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg12 UMN101A locus 14.8 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 UMN101A locus 14.8 () Automated name-based View Maps
acor195A(Pg3) locus 2.3 No other positions
pOP6(A) locus 2.3 Oat - Oat-2010-MAMA - Oat-2010-MAMA-TM_3 pOP6(A) locus 0 (cM) Automated name-based View Maps

GrainGenes is a product of the US Department of Agriculture.