*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, 2012 9KSNP v2
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Barley2012_9KSNPv2-4H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, 2012 9KSNP v2 [ View Map Set Info ]
Map Name: Barley2012_9KSNPv2-4H
Map Start: 0 cM
Map Stop: 115.2 cM
Features by Type:
346 locus
346 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 346.       of 14 | Next
Barley - Barley, 2012 9KSNP v2 - Barley2012_9KSNPv2-4H
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
SCRI_RS_150051 locus 0 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_150051 locus 0.41 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_150051 locus 0 () Automated name-based View Maps
12_30764 locus 0.3 Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 12_30764 locus 0 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 12_30764 locus 0 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 12_30764 locus 0 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-7H 12_30764 locus 0 (cM) Automated name-based View Maps
SCRI_RS_185058 locus 0.4 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_185058 locus 0.4 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_185058 locus 0.81 () Automated name-based View Maps
SCRI_RS_164381 locus 0.5 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_164381 locus 0.5 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_164381 locus 0.91 () Automated name-based View Maps
SCRI_RS_32890 locus 0.6 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_32890 locus 0.6 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_32890 locus 1.01 () Automated name-based View Maps
SCRI_RS_170785 locus 0.8 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_170785 locus 1.21 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_170785 locus 0.8 () Automated name-based View Maps
SCRI_RS_173731 locus 1.1 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_173731 locus 1.51 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_173731 locus 1.1 () Automated name-based View Maps
12_31324 locus 1.1 Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 12_31324 locus 0.8 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 12_31324 locus 0.8 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 12_31324 locus 0.8 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-7H 12_31324 locus 0.8 (cM) Automated name-based View Maps
SCRI_RS_176074 locus 1.1 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_176074 locus 1.51 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_176074 locus 1.1 () Automated name-based View Maps
SCRI_RS_149873 locus 1.1 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_149873 locus 1.1 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_149873 locus 1.51 () Automated name-based View Maps
SCRI_RS_13428 locus 1.3 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_13428 locus 1.71 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_13428 locus 1.3 () Automated name-based View Maps
SCRI_RS_154517 locus 2.9 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_154517 locus 2.9 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_154517 locus 3.31 () Automated name-based View Maps
11_21056 locus 3.5 Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_21056 locus 2.64 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-7H 11_21056 locus 2.64 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_21056 locus 2.64 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_21056 locus 2.64 (cM) Automated name-based View Maps
11_10208 locus 3.6 Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_10208 locus 2.64 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_10208 locus 2.64 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_10208 locus 2.64 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-7H 11_10208 locus 2.64 (cM) Automated name-based View Maps
11_10113 locus 14.7 Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-7H 11_10113 locus 18.33 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_10113 locus 18.33 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_10113 locus 18.33 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_10113 locus 18.33 (cM) Automated name-based View Maps
SCRI_RS_180891 locus 14.9 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_180891 locus 14.9 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_180891 locus 20.34 () Automated name-based View Maps
SCRI_RS_105960 locus 15 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_105960 locus 15 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_105960 locus 20.44 () Automated name-based View Maps
SCRI_RS_119628 locus 17.8 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_119628 locus 23.24 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_119628 locus 17.8 () Automated name-based View Maps
11_10221 locus 18.3 Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_10221 locus 22.24 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-7H 11_10221 locus 22.24 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_10221 locus 22.24 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-4H 11_10221 locus 22.24 (cM) Automated name-based View Maps
SCRI_RS_150585 locus 18.5 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_150585 locus 24.23 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_150585 locus 18.5 () Automated name-based View Maps
SCRI_RS_154178 locus 18.5 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_154178 locus 24.23 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_154178 locus 18.5 () Automated name-based View Maps
SCRI_RS_134182 locus 19.9 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_134182 locus 19.9 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_134182 locus 25.34 () Automated name-based View Maps
SCRI_RS_12719 locus 19.9 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_12719 locus 25.34 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_12719 locus 19.9 () Automated name-based View Maps
SCRI_RS_162743 locus 20.9 Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_162743 locus 26.34 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_162743 locus 20.9 () Automated name-based View Maps
SCRI_RS_127657 locus 21.2 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H SCRI_RS_127657 locus 21.2 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_4H SCRI_RS_127657 locus 26.64 () Automated name-based View Maps

GrainGenes is a product of the US Department of Agriculture.