*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Diploid oat-Diploid Oat, Iowa St.
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Avena-Wise-B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Diploid oat - Diploid Oat, Iowa St. [ View Map Set Info ]
Map Name: Avena-Wise-B
Map Start: 0
Map Stop: 306.2
Features by Type:
19 locus
19 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 19 of 19.
Diploid oat - Diploid Oat, Iowa St. - Avena-Wise-B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
BCD1549 locus 63.5 Wheat S^l^ - Oat-2004-SxW-RGA - Oat-2004-SxW-RGA_AswBF bcd1549 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswBF bcd1549 locus 17 (cM) Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-E Xbcd1549.1 locus 10.4 () Automated name-based View Maps
ISU1188 locus 263.1 Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswD isu1188 locus 157 (cM) Automated name-based View Maps
ISU1367 locus 284.1 Oat - Oat-2009-KxO - Oat-2009-KxO_1_3_38_break ISU1367 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg18 ISU1367 locus 67.7 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-3+38 ISU1367 locus 73.4 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-18 ISU1367 locus 67.7 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 ISU1367 locus 153.75 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-3 Xisu1367 locus 38.2 () Automated name-based View Maps
Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswD isu1367 locus 134 (cM) Automated name-based View Maps
ISU1387 locus 129.7 No other positions
ISU1410 locus 0 Diploid oat - Diploid Oat, AFLP - Avena-Yu-A Xisu1410b locus 178.6 () Automated name-based View Maps
Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswBF isu1410 locus 21 (cM) Automated name-based View Maps
ISU1464 locus 90.4 No other positions
ISU1658 locus 306.2 No other positions
ISU1754 locus 40 No other positions
ISU1766 locus 152.3 Diploid oat - Diploid Oat, AFLP - Avena-Yu-A Xisu1766 locus 245 () Automated name-based View Maps
ISU1769 locus 179 No other positions
ISU1771 locus 188 No other positions
ISU1786A locus 206.2 No other positions
ISU1786B locus 151.6 No other positions
ISU1876 locus 58.6 Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswBF isu1876 locus 19 (cM) Automated name-based View Maps
Diploid oat - Diploid Oat, AFLP - Avena-Yu-E Xisu1876 locus 44 () Automated name-based View Maps
ISU1902 locus 145.3 No other positions
ISU2033 locus 243.2 Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswD isu2033 locus 183 (cM) Automated name-based View Maps
ISU2189 locus 169.1 No other positions
ISU2199 locus 197 No other positions
ISU2204 locus 102.7 Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswBF isu2204 locus 66 (cM) Automated name-based View Maps

GrainGenes is a product of the US Department of Agriculture.