Triticeae groups 1 - 3 and 6 consensus maps
From Allen Van Deynze, Sep 1994
and Clare Nelson, Apr - Dec 1995
References:
A.E. Van Deynze, J. Dubcovsky, K.S. Gill, J.C. Nelson, M.E. Sorrells, J.
Dvorak, B.S. Gill, E.S. Lagudah, S.R. McCouch, R. Appels. 1995.
Molecular-genetic maps for group 1 chromosomes of Triticeae species and
their relation to chromosomes in rice and oat. Genome 38:45-59.
J.C. Nelson, A.E. Van Deynze, E. Autrique, M.E. Sorrells, Y.H. Lu, M. Merlino,
M. Atkinson, P. Leroy. 1995. Molecular mapping of wheat. Homoeologous
Group 2. Genome 38:516-524.
J.C. Nelson, A.E. Van Deynze, E. Autrique, M.E. Sorrells, Y.H. Lu, S. Negre,
M. Bernard, P. Leroy. 1995. Molecular mapping of wheat. Homoeologous
Group 3. Genome 38:525-533.
C.L. Marino, J.C. Nelson, Y.H. Lu, M.E. Sorrells, P. Leroy, N.A. Tuleen,
C.R. Lopes and G.E. Hart. 1996. Molecular genetic maps of the group 6
chromosomes of hexaploid wheat (Triticum aestivum L. em. Thell). Genome
39: 359-366.
A consensus map for the Triticeae tribe was developed using wheat as a
base. Loci were included in the consensus map only when their order agreed
among maps within a species and they were present in at least two linkage
maps of group 1 chromosomes of Triticeae species. The relative position of
markers was determined by the location of common markers in the individual
linkage maps.
The map for group 1 includes data from seven wheat linkage maps, T.
aestivum, T. monococcum, T monococcum/T. aestivum (Van Deynze et al. 1995),
T. tauschii (Gill et al 1993; Lagudah et al. 1991); four barley maps (Heun
et al. 1991; Kleinhofs et al. 1993, 1994; Graner et al. 1994; Schondelmaier
et al. 1993); and two rye maps (Baum and Appels 1991, Devos et al. 1993).
The relative distances reflect those of chromosome 1B of T. aestivum. The
map was constructed so that the distance between Gli1 and XGlu1 equaled
approximately 75 cM.
The map for group 2 includes data from wheat (Nelson et al. 1995a), T.
tauschii (Gill et al. 1991, 1993), barley (Graner et al. 1991, 1994; Heun
et al. 1991; Kleinhofs et al. 1993), and rice (Ahn and Tanksley, 1993).
The map for group 3 includes data from wheat (Nelson et al. 1995b), T.
tauschii (Gill et al. 1991, 1993), and barley (Kleinhofs et al. 1993).
The map for group 6 includes data from hexaploid and tetraploid wheat,
barley and T. tauschii and a physical map of hexaploid wheat. Markers with
centimorgan positions were placed on the 6A map at a LOD greater than or
equal to 3, and the map locations shown for these markers are the same as
they are on the 6A map. Other markers were assigned map positions
equidistant from one another in the intervals between these markers, except
for two pairs of markers that have thus far been mapped to the same
position.
Short arm is at the top. Markers preceded by an X are DNA markers and
those without an X indicate genes encoding traits or isozymes. The marker
preceded by a Q is a QTL.
Group 1
Locus Map Position, cM
----- ----------------
Lr 0
Lr21 0
Bg 1
Hg 1
Rg2 1
Gli1 2
Xbcd1434 3
Pm3 3
QPhs.cnl 3
XksuD14 5
Sr33 5.5
Xmwg938 6
XGlu3 6
Xcmwg645.1 8
Xmwg36 10
XMla 13
Xabc156 19
Xmwg68 19
Gpi 19
Rf3 19
Xbcd249 21
XChs3 21
XGli3 21
Xmwg837 21
Xcdo388 23
XksuE19 23
XksuE18 27
Xbcd98 32
Xcdo99 32
X5SDna 32
XcslH69 34
XNor 36
Xcdo580 42
XTri 42
Xrz244 44
Xcdo1173 47
Xcdo1188 49
Xcdo658 49.7
Xpsr161 49.7
Xpsr393 49.7
Xbcd762 49.8
Xcdo618 49.8
Xwg789 49.8
Xwg811 49.8
Xbcd1072 50.1
Centromere 50.2
Xbcd200 50.3
XEsi47 50.3
Xabg452 51
Xbcd207 51
Xbcd386 51
Xcdo98 51
Xcmwg645.2 51
Xcmwg758 51
Xwg180 51
Xwg605 51
Xbcd1449 51.6
Xpsr158 51.6
XDor2 52.3
XEm 52.3
XPpdk 52.3
Xmwg800 53.9
Xcdo89 54.3
XGlb1 54.3
Xbcd454 56
Xabc160 61
Xwg983 71
Xabg464 74
Xcdo312 75
XksuG55 78
XksuD49 79
Xbcd738 80
Xbcd1150 80
XPgk 80
XGlu1 81
Xpsr330 81
XSec3 81
Xcdo572 87
XLec 87
Xpsr162 88
XksuG2 91
XPgd2 92
Xcmwg733 98
Xbcd1930 98
Xbcd808 99
Xbcd265 101
Xbcd442 102
XksuE8 102
Xtam2 102
XATP 105
XCab2 110
Xcmwg701 110
XAdh 111
Xbcd304 116
XksuG34 118
Xcmwg710 129
Xbcd1562 131
Xbcd508 134
Xbcd1261 140
Xcdo346 149
Xmwg632 149
XAga7 155
Xtam7 156
Xmwg912 161
XksuE11 163
Xcdo393 164
Xksul27 164
Xabg387 167
Xwg241 168
Group 2
Locus Map Position, cM
-------- ----------------
W2^I^ 0.4
Xcmwg682 17.2
Xabg58 21.0
Xcdo456 24.0
Xbcd348 24.7
Xabg703 25.5
Chs1 26.6
Xcdo57 27.7
XksuD18 28.9
Xmwg878 29.6
Xbcd1970 30.7
Xwg516 31.9
Xabg8 33.4
Xbcd718 34.9
Xfba274 36.4
Xfba280 39.4
Xbcd1184 42.7
Xfba272 46.5
Xrz69 49.8
Xabg2 57.7
Xmwg858 65.6
Xcdo64 72.3
Xmwg520 79.5
Xcmwg663 86.6
Xmwg950 93.7
Xbs128 100.8
Xbcd152 107.9
Xcdo405 111.7
Xbcd855 113.2
Xfba374 115.1
Xcdo370 116.2
Xwg405 118.1
Xcdo537 119.2
Xmwg557 120.7
Xabg356 122.2
XksuF11 123.7
Xbcd260 124.8
Xwg996 126.7
Centromere 129.0
XksuG5 131.2
Xfbb284 135.3
XksuE16 137.2
XksuD22 143.2
Xcdo373 145.8
Xcdo474 148.8
XksuF15 151.4
Xbcd266 154.8
Xmwg503 159.3
Xfba062 162.7
Xfba276 163.8
Xfba061 165.3
Xbcdl095 166.4
Xpsr934 169.8
Xfba116 171.7
XksuF41 173.9
Xcdo678 177.6
Xbcd292 181.8
Xcmwg660 185.1
Xfba385 187.0
Xcmwg720 188.9
Xglk558 190.8
XksuH9 192.6
XksuD23 195.3
XksuHl6 197.5
Xbcd410 200.9
Xwg645 202.8
Xbg123 204.6
Xcdo36 206.1
Xfba314 209.5
Xbcd1231 211.4
Group 3
Locus Map position, cM
------- ----------------
Xglk683 0.0
XksuG53 10.2
Xcdo460 13.0
Xtam47 16.6
Xtam61 21.9
Xfba091 26.0
Xcdo395 30.1
Xabg460 33.3
Xcdo1164 36.1
Xabg471 39.4
Xmwg22 43.5
Xmwg14 44.7
Xcdo1435 45.9
Xbcd1532 47.5
XksuA6 50.8
Xcdo638 52.4
XksuH7 53.6
Xcdo328 54.8
Xpsr903 56.9
Centromere 60.1
Xcmwg688 60.1
XATPase 63.4
Xcdo54 64.2
Xcdo1174 65.0
Xbcd828 65.8
Xmwg802 66.6
Xbcd809 67.8
Xcdo118 69.4
Xwg177 72.3
Xbcd134 73.5
Xabc176 74.3
Xcdo1406 74.7
XksuH2 75.5
Xmwg818 76.8
Xbcd115 77.6
Xmwg961 80.4
Xmwg30 108.4
Xmwg69 113.7
Xbcd372 116.1
Xbcd1555 122.2
Xwg110 126.3
XksuH15 129.9
XksuD19 135.2
Xbcd131 138.9
Xabc174 142.9
Xcdo105 147.0
Xbg131 151.1
XksuE14 153.1
Xtam63 155.1
Xabc172 164.1
Xabc172 188.0
Xmwg11 196.5
XksuG59 223.8
Group 6
Locus Map Position, cM
--------- ----------------
Xpsr167 -89.7
Xabg466
Xbcd342 -86.9
Xpsr899
Xbcd1821 -84.8
Xcdo476 -81.4
Xfba307 -68.7
Xpsr964
Xpsr8(Cxp3)
Xcmwg652 -63.8
XksuG48 -62.6
Xpsr10(Gli-2) -52.4
Xtam60
XksuH4
Xfba85 -41.3
Xfba152 -41.3
Xtav1929(Cyp)
Xpsr627
Xpsr106
Xfbb283
Xcdo270 -16.0
Xpsr141
Xpsr312
Xtam10
Xtam31
Centromere 0.0
Xabg20
Xbcd1716
Xpsr463(Prk) 8.9
Xpsr142
Xpsr915
Xtam36 15.7
Xmwg934
Xcmwg669
Xwg341
Xpsr154
Xcsb112(Dhn5) 44.4
Xfbb169
Xfba111 64.7
Xtam28
XksuE14
XksuD1
Xtam21
Xcdo836
Xbcd1510
Xmwg74
Xfbb82 77.7
XksuD12
XksuD27 81.1
Xfbb70
Xfbb59
Xmwg2053 88.5