Genetic map of diploid oat, A. atlantica x A. hirtula
From Mark Sorrells, 12/92
Update from Allen Van Deynze, 21 Mar 1995
References:
Allen E. Van Deynze, James C. Nelson, Louise S. O'Donoughue, Sang Nag Ahn,
Wiliwan Siripoonwiwat, Sandra E. Harrington, Eliana S. Yglesias, Daniella
P. Braga, Susan R. McCouch, and Mark E. Sorrells. 1995. Comparative
mapping in grasses. Oat relationships. Molecular and General Genetics,
submitted.
L.S. O'Donoughue et al. 1992. An RFLP-based linkage map of oats based on
a cross between two diploid taxa (Avena atlantica x A. hirtula). Genome
35: 765-771.
The population consisted of 44 F2 derived F3 families from a cross between
two A-genome diploid species, A. atlantica Baum et Fedak and A. hirtula
Lag. (O'Donoughue et al. 1992). The linkage maps were developed by placing
markers at a LOD threshold of 2.0 using Mapmaker v3.0.
Map positions in cM (Kosambi). Markers indicated without a value for
"Map Position" were mapped only to the indicated interval.
Linkage Group Locus Map Position
A Xcdo1473
A Xmwg68
A Xmwg938
A Xcdo1423 0
A XksuD14 0
A Xmwg645 0
A Xumn162
A Xrz390 11.7
A Xbcd15
A Xcdo718
A Xbcd1340 35.3
A Xcdo353 35.3
A Xrz244
A Xrz583
A Xcdo520 47
A Xcdo580 47
A Xcdo1173.1 47
A Xbcd200
A Xbcd386
A Xbcd1072
A Xbcd1871
A Xcdo98
A Xcdo426
A Xcdo618
A Xrz500
A Xrz892
A Xbcd454 50.6
A Xbcd719 50.6
A Xbcd1449 50.6
A Xbcd1964 50.6
A Xcdo82 50.6
A Xcdo220 50.6
A Xcdo598 50.6
A Xcdo1513 50.6
A Xcdo564
A Xbcd896 51.7
A Xbcd1405 51.7
A Xcdo949 51.7
A Xcdo312 52.8
A Xcmwg800
A Xbcd946 56.3
A Xbcd1150 56.3
A Xcdo1519 56.3
A Xcdo590 56.3
A Xbcd1119
A Xcdo442
A Xmwg733 66.6
A Xcmwg676
A Xbcd1562 75.1
A Xcdo346
A Xbcd1261 81.5
A Xbcd1700
A Xcdo202 84.3
A Xcdo393 86.9
A Xcdo109
A Xcdo270
A Xcdo476
A Xcdo1173.2
A Xbcd1095 106.5
A Xbcd342 108.8
A Xrz574 112.3
A Xcdo395 112.3
A Xrz574 112.3
A Xbcd929 114.9
A Xcdo216
B Xbcd98
B Xcdo456 0
B Xbcd348
B Xcdo447
B Xcdo1445 11.6
B Xbcd1237 15.4
B Xbcd266
B Xbcd987
B Xcdo680
B Xbcd135 19.3
B Xbcd92
B Xcdo244
B Xcdo539 30.4
B Xcdo1417 38
B Xmwg649.1 38
B Xbcd1829 44.4
B Xbcd1428 51.4
B Xcdo1328 53
B Xbcd1030
B Xcdo395
B Xcdo667
B Xrz387.1
B Xwg996
B Xbcd1856 59.9
B Xcdo365 59.9
B Xcdo385 59.9
B Xcdo534 62.4
B Xrz476
B Xrz87 68.9
B Xcdo948 74
B Xcdo524 74
B Xcdo1158 76.3
B Xbcd1750 76.3
B Xbcd1823 76.3
B Xcdo196 77.4
B Xbcd1882
B Xcmwg649.2
B Xrz387.2
B Xbcd1819 94.5
B Xcdo941
B Xcdo942 116.2
B XksuD14
C Xcdo36 0
C Xbcd1184 12.6
C Xbcd981 18
C Xbcd1874 18
C Xcdo1502 21
C Xcdo1479
C Xcdo941 29.4
C Xcdo1509 29.4
C Xrz69 29.4
C Xcdo608
C Xcdo1523
C Xrz444
C Xcdo1425 35.3
C Xbcd927 37
C Xcdo54 37
C Xbcd941 38.7
C Xcdo1174 38.7
C Xbcd263 40.2
C Xcdo586 40.2
C Xbcd721 40.2
C Xbcd1194 40.2
C Xbcd1495 40.2
C Xcdo328 40.2
C Xcdo585 40.2
C Xcdo1160 40.2
C Xcdo1253 40.2
C Xrz244 40.2
C Xbcd850
C Xbcd1686
C Xcdo118
C Xcdo920
C Xrz776
C Xbcd828 43.3
C Xbcd134
C Xcdo1421
C XNor
C Xbcd1142 47.1
C Xbcd1819 47.1
C Xcdo353 47.1
C Xcdo1241 50
C Xcdo638 53.9
C Xumn133 53.9
C Xbcd1532.1 60.3
C Xcdo1435 60.3
C Xcdo549
C Xcdo460 67.2
C Xrz543 75.3
C Xbcd1278
C Xcdo1527 96.9
C Xbcd1532.2
D Xrz516 0
D Xbcd1872 10.6
D Xcdo586 13.1
D Xrz2 13.1
D Xcdo545
D Xcdo1378 19.2
D Xbcd98
D Xcdo516
D Xcdo1241
D Xcdo1271
D Xcdo676 24.4
D Xcdo1467 24.4
D Xcdo1525 28.8
D Xrz612
D Xrz952
D Xcdo17 30.2
D Xcdo1466 30.2
D Xbcd149 31.3
D Xcdo341 31.3
D Xbcd1059 32.4
D Xbcd147 33.5
D Xbcd1311 33.5
D Xrz397 33.5
D Xbcd421
D Xbcd539
D Xcdo595
D Xcdo1428
D Xbcd782 34.6
D Xbcd938 34.6
D Xbcd1355 34.6
D Xbcd1502 34.6
D Xcdo407 34.6
D Xcdo1451 34.6
D Xcdo1454 34.6
D Xcdo962 35.7
D Xbcd1226
D Xcdo78
D Xrz242 37.6
D Xbcd1779
D Xwg686 46.7
D Xcdo686
D XksuE19 67.1
D Xrz682 78.6
D Xcdo414 83.7
D Xwg420 83.7
D Xbcd1280 86
D Xcdo585 94.5
D Xrz508 94.5
D Xcdo645 101.7
D Xcdo89
E Xbcd820
E Flo
E Xcdo1373 0
E Xbcd961
E Xbcd1549.1
E Xcdo442
E Xbcd1413 20.7
E Xbcd1965 20.7
E Xbcd114 23
E Xcdo520 23
E Xbcd1588 24.7
E Xbcd1829 24.7
E Xcdo373 24.7
E Xcdo758 24.7
E Xcsu25 24.7
E Xumn267 24.7
E Xrz141
E Xcdo1015 26.4
E Xcdo36
E Xrz404
E Xcdo795 33.6
E Xcdo669 37.1
E Xcdo241.1
E Xcdo337
E Xbcd944 41.1
E Xcdo542
E Xbcd1643 43.7
E Xcdo122
E Xcdo504 46.3
E Xcdo708 46.3
E Xcdo465 48.6
E Xbcd450
E Xbcd881 50.8
E Xbcd1427 50.8
E Xbcd1734 50.8
E Xrz395 50.8
E Xbcd808
E Xcdo87
E Xcdo1505
E Xcdo1475 55.3
E Xcdo241.2 57.9
E Xcdo1469 57.9
E Xcdo457 61.4
E Xbcd1670
E Xmwg645
E Xcdo484 68.9
E Xbcd1421 74.9
E Xbcd1802 74.9
E Xrz614 74.9
E Xbcd1727
E Xbcd1549.2 82.4
E Xbcd1087
E Xcdo735 86.3
E Xbcd799 88.2
E Xbcd1355 88.2
E Xcdo212 91.4
E Xcdo412 94.7
E Xbcd926 98.6
E Xbcd1088
E Xcdo57 99.9
E Xbcd351 105.8
E Xbcd385 105.8
E Xrz596
E Xcdo400 110.6
E Xcdo1508 118.8
F Xbcd402
F Xbcd450 0
F Xcdo1081 21.7
F Xcdo1528
F Xcdo20
F Xcdo1527 24.9
F Xwg114
F Xcdo1246 32.3
F Xrz400
F Xcdo1401 36.1
F Xbcd446 39.2
F Xcdo470
F Xbcd1230 44.5
F Xcdo91 46.6
F Xcdo1395 49.3
F Xbcd221
F Xcdo541
F Xrz251
F Xbcd110 55.3
F Xbcd250 55.3
F Xbcd895 55.3
F Xbcd1130 55.3
F Xbcd1250 55.3
F Xbcd1707 55.3
F Xcdo38 55.3
F Xcdo64 55.3
F Xcdo344 55.3
F Xcdo749 55.3
F Xcdo938 55.3
F Xcdo1335 55.3
F Xcdo1416 55.3
F Xcdo1439 55.3
F Xcdo1462 55.3
F Xcdo1516 55.3
F Xcdo127
F Xcdo459
F Xcdo517
F Xcdo1387
F Xrz261
F Xcdo1049 64.3
F Xabc164
F Xcdo426 86.9
G Xcdo482 0
G Xcdo105
G Xbcd1661 12.5
G Xbcd1555 22.4
G Xwg110 22.4
G Xcdo345 28.6
G Xcdo38
G Xcdo1495 33.3
G Xrz213
G Xcdo608 40.6
G Xbcd349
G Xcdo689 46.8
G Xcdo1436 46.8
G Xcdo1255
G Xcdo1281
G Xrz446
G Xbcd929b 57.5
G Xbcd1047 57.5
G Xcdo527 66.1
G Xcdo455
G Xbcd1796 71
G Xbcd1302 75.6
G Xbcd1829 79
G Xcdo516
G Xbcd450 82.5
G Xbcd1094 82.5
G Xbcd1682 82.5
G Xbcd421 83.6
G Xbcd1234 83.6
G Xcdo1380 83.6
G Xcdo1428 84.7
G Xcdo497 87
G Xbcd1860
G Xrz273 91.7
G Xbcd1765
G Xbcd1625 93.1
G Xbcd1631 93.1
G Xcdo507 93.1
G Xcdo772
G Xcdo59 97.5