VI. CATALOGUE OF GENE SYMBOLS FOR WHEAT: 2001 Supplement [p. 333-354]

R.A. McIntosh 1 , G.E. Hart 2 , K.M. Devos 3 and W.J. Rogers 4.

1 Plant Breeding Institute, The University of Sydney, 107 Cobbitty Rd., Cobbitty, N.S.W., Australia, 2570.
2 Department of Soil & Crop Sciences, Texas A&M University, College Station, Texas, USA, 77843.
3 John Innes Centre, Norwich Research Park, Colney, Norwich, Norfolk, NR4 7UH, UK.
4 Catedra de Genetica y Fitotecnia, Universidad Nacional del Centro de la Provincia de Buenos Aires, 7300 Azul,
Argentina.

The most recent edition of the Catalog appeared in the Proceedings of the 9th International Wheat Genetics Symposium Vol. 5 (Slinkard AE ed, University Extension Press, University of Saskatchewan, Saskatoon, Canada). A modified version is displayed on the Graingenes Website http://wheat.pw.usda.gov/.

The 1999 and 2000 Supplements are included in Annual Wheat Newsletters and Wheat Information Service and are listed in the Graingenes Website. The present Supplement will be offered to editors/curators for similar listing.


2001 Supplement.

Revisions.


10. Laboratory Designators for DNA markers

 ccsu
 Gupta, P.K.
Molecular Biology Laboratory
Department of Agricultural Botany
Ch. Charan Singh University*
Meerut­250004
India
 gdm
 Roder, M.S.
(Gatersleben D-genome microsatellite*)
Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK)
Corrensstrasse 3
06466 Gatersleben
Germany
 ycu  Ogihara, Y.
Kihara Institute for Biological Research Yokohama City University*
Nakamura-cho 2-120-3
Yokohama Kanagawa Pref., 232
Japan
ogihara@yokohama-cu.ac.jp


Morphological, Physiological, Molecular, and DNA Traits

To reference {0066} given in the first paragraph in the 2000 Supplement add {0109}.

Gross Morphology: Spike characteristics

1. Squarehead/spelt

Q. ma : Complete linkage with cDNA clone PtAq22 {0127}.

q. At end of section add : 'The speltoid phenotype of at least some spelts may be caused by genes at other loci {0140}.'.

2. Club/Compact spike
QTL: Six QTLs for spike compactness were detected in 'Courtot/Chinese Spring' {0114}, but only four on chromosome arms 1AL, 2BS, 2DS, and 4AS were consistent for at least 2 years.

Aluminium Tolerance
Alt2. v : BH1146 {1213,0115}; IAC-24} 0115}; IAC-60 {0115}; 13 induced mutants of Anahuac {0115}.

Brittle Rachis
Br2 {0130}. 3A {0130}. Su:tv : LDN(DIC 3A) {0130}.
Br3 {0130}. 3B {0130}. Su:tv: LDN(DIC 3B) {0130}.

Evidence for a homoeologous series extending to many related species is discussed in {0130}.

Crossability with Rye, Hordeum, and Aegilops spp.
1. Common wheat

QTL: 65 % of the variability in a 'Courtot/CS' population was associated with Xfba367-5A (5BS), Xwg583-5B (5BL), and Xtam51-7A {0134}. Only the second QTL appears to coincide with known locations of Kr genes.

 

DNA Markers

Group 1S

Amendments:

Add:

 Xgdm33-1A {0173}    DMS F33/DMS R33.  (1D).
 Xgdm33-1D {0173}.    DMS F33/DMS R33.  (1A).
 Xgdm60-1D {0173}.    DMS F60/DMS R60.  .
 Xgwm359-1B [{0170}].  [Xgwm359b-1B {0170}].  WMS F359/WMS R359.  (2A).
 Xgwm911-1B {0171}.    WMS F911/WMS R911.  
 Xmwg2245-1D {0135}.    MWG2245.  
 Xwmc333-1A {0165}.    WMC 333F/WMC 333R {0166}.  

Group 1L

Amendments:

Add:

 Xgdm19-1D {0173}.    DMS F19/DMS R19.  (2D).
 Xgdm111-1D {0173}.    DMS F111/DMS R111.  
 Xgdm126-1D {0173}.    DMS F126/DMS R126.  
 Xgwm633-1A {0171}.    WMS F633/WMS R633.  


Group 1

Amendments:

Add:

 Xgdm28-1B {0173}.    DMS F28/DMS R28.  (6A).
 Xgwm376-1A [{0171}].  [Xgwm376d-1Ai {0171}].  WMS F376/WMS R376.  (3B, 7A).
 Xgwm408-1B [{0170}].  [Xgwm408b-1B {0170}].  WMS F408/WMS R408.  (5B).
 Xgwm558-1A [{0171}].  [Xgwm558c,d-1A {0171}].  WMS F558/WMS R558.  (2A).
 Xgwm903-1B {0171}.    WMS F903/WMS R903.  
 Xgwm934-1B {0171}.    WMS F934/WMS R934.  (2AS, 2A, 3D).
 Xwmc44-1B {0153}.    WMC 44F/WMC 44R {0154}.  (3B, 5A,B,D,
6AL, 6BS, 7D).
 Xwmc120-1A {0153}.    WMC 120F/WMC 120R {0155}.  
 Xwmc254-1A {01106}.    WMC 254F/WMC 254R.  (4B).

Group 2S

Amendments:

Add:

 Xgdm5-2A {0173}.    DMS F5/DMS R5.  (2D).
 Xgdm5-2D {0173}.    DMS F5/DMS R5.  (2A).
 Xgdm19-2D {0173}.    DMS F19/DMS R19.  (1D).
 Xgdm35-2D {0173}.    DMS F35/DMS R35.  
 Xgdm107-2D {0173}.    DMS F107/DMS R107.  
 Xgwm68-2A [{0171}].  [Xgwm68a-2A {0171}].  WMS F68/WMS R68.  (5B, 7B).
 Xgwm297-2A [{0171}].  [Xgwm297b-2A {0171}].  WMS F297/WMS R297.  (4A, 7B).
 Xgwm630-2A [{0171}].  [Xgwm630c-2A {0171}].  WMS F630/WMS R630.  (2B).


Group 2L

Amendments:

Add:

 Xgdm6-2D {0173}.    DMS F6/DMS R6.  
 Xgdm87-2B {0173}.    DMS F87/DMS R87.  (2D).
 Xgdm87-2D {0173}.    DMS F87/DMS R87.  (2B).
 Xgdm93-2A {0173}.    DMS F93/DMS R93.  (2D, 4B).
 Xgdm93-2D {0173}.    DMS F93/DMS R93.  (2A, 4B).
 Xgdm114-2B {0173}.    DMS F114/DMS R114.  (5A).
 Xgwm88-2B [{0171}].  [Xgwm88b-2B {0171}].  WMS F88/WMS R88.  (6B).


Group 2

Add:

 Xgdm29-2D {0173}.    DMS F29/DMS R29.  
 Xgdm77-2D {0173}.    DMS F77/DMS R77.  
 Xgdm86-2B {0173}.    DMS F86/DMS R86.  (7D).
 Xgdm124-2B {0173}.    DMS F124/DMS R124.  
 Xgdm148-2D {0173}.    DMS F148/DMS R148.  
 Xgwm403-2B [{0171}].  [Xgwm403b-2B {0171}].  WMS F403/WMS R403.  (1B).
 Xgwm582-2A [{0171}].  [Xgwm582-2A {0171}].  WMS F582/WMS R582.  (1B, 6B).
 Xwmc24-2A {0153}.    WMC 24F/WMC 24R {0162}.  
 Xwmc25-2D {0153}.    WMC 25F/WMC 25R {0162}.  
 Xwmc149-2B {0153}.    WMC 149F/WMC 149R {0156}.  
 Xwmc167-2D {0153}.    WMC 167F/WMC 167R {0157}.  
 Xwmc170-2A {0153}.    WMC 170F/WMC 170R {0157}.  
 Xwmc245-2D {0153}.    WMC 245F/ WMC 245R {0159}.  
 Xwmc257-2B {01106}.    WMC 257F/WMC 257R.  
 Xwmc261-2A {01106}.    WMC 261F/WMC 261R.  
 Xwmc265-2B {01106}.    WMC 265F/WMC 265R.  

Group 3S

Amendments:

Add:

 Xgdm72-3D {0173}    DMS F72/DMS R72.  
 Xgwm107-3B [{0171}].  [Xgwm107a-3B {0171}].  WMS F107/WMS R107.  (4B, 6B).
 Xgwm374-3A [{0171}].  [Xgwm374b-3A {0171}].  WMS F374/WMS R374.  (2B).
 XksuD30-3B {0152}.    pTtksuD30.  (5A,B,D).


Group 3L

Amendments:

Add:

 Xgdm8-3D {0173}.    WMS F705/WMS R705.  
 Xgdm38-3D {0173}.    DMS F38/DMS R38.  
 Xgdm128-3D {0173}.    DMS F128/DMS R128.  
 Xgdm134-3A {0173}.    DMS F134/DMS R134.  
 Xgwm55-3B [{0171}].  [Xgwm55c-3B {0171}].  WMS F55/WMS R55.  (2B, 6D).
 Xgwm113-3B [{0171}].  [Xgwm113b-3B {0171}].  WMS F113/WMS R113.  (4B).
 Xgwm247-3A [{0171}].  [Xgwm247b-3A {0171}].  WMS F247/WMS R247.  (3B).
 Xgwm273-3B [{0171}].  [Xgwm273c-3B {0171}].  WMS F273/WMS R273.  (1B, 3A).
 Xgwm340-3A [{0171}].  [Xgwm340b-3A {0171}]  WMS F340/WMS R340.  (3B).
 Xgwm497-3A [{0171}].  [Xgwm497c-3A {0171}].  WMS F497/WMS R497.  (1A, 2A, 3D, 5B).

Group 3

Amendments:

Add:

 Xgdm62-3D {0173}.    DMS F62/DMS R62.  
 Xgdm64-3B {0173}.    DMS F64/DMS R64.  
 Xgdm120-3B {0173}.    DMS F120/DMS R120.  
 Xgwm273-3A [{0171}].  [Xgwm273b-3A {0171}].  WMS F273/WMS R273.  (1B, 3B).
 Xwmc169-3A {0153}.    WMC 169F/ WMC 169R {0157}.  
 Xwmc255-3D {01106}.    WMC 255F/WMC 255R.  
 Xwmc264-3A {01106}.    WMC 264F/WMC 264R.  

 

Group 4S (4AL:4BS:4DS)

Add:

 Xgdm129-4D {0173}.    DMS F129/DMS R129.  

 

Group 4L (4AS:4BL:4DL)

Amendments:

Add:

 Xgdm93-4B {0173}.    DMS F93/DMS R93.  (2A,D).
 Xgdm125-4D {0173}.    DMS F125/DMS R125.  (6B).
 It is not clear whether Xgdm125-4D belongs to the group 4L or to the group 5AL:5BL:4DL.
 Xgwm297-4A [{0171}].  [Xgwm297c-4A {0171}].  WMS F297/WMS R297.  (2A, 7B).
 Xgwm663-4A {0171}.    WMS F663/WMS R663.  

Group 5AL:4BL:4DL

Amendment:

Add:

 Xycu518-5A,4B,4D {0186}.    pTaQ18.  
 Xycu524-5A,4B,4D {0186}.    pTaQ24.  

Group 4

Amendments:

Add:

 Xgdm34-4D {0173}.    DMS F34/DMS R34.  
 Xgdm40-4D {0173}.    DMS F40/DMS R40.  
 Xgdm61-4D {0173}.    DMS F61/DMS R61.  
 Xgdm88-4A {0173}.    DMS F88/DMS R88.  
 Xgdm133-4D {0173}.    DMS F133/DMS R133.  (5B).
 Xgdm145-4A {0173}.    DMS F145/DMS R145.  
 Xwmc35-4B {0153}.    WMC 35F/WMC 35R {0162}.  
 Xwmc254-4B {0153}.    WMC 254F/WMC 254R.  
 Xwmc251-4B {01106}.    WMC 251F/WMC 251R.  



Group 5S

Amendments:

Add:

 Xgdm109-5A {0173}.    DMS F109/DMS R109.  
 Xgwm415-5A {9929, 0178}.    WMS415F/WMS415R.  
 Xutv711-5A {0152}.    UTV711.  
 Xutv1441-5A {0152}..    UTV1441.  


Group 5L

Amendments:

Add:

 Xabc155-5A,B,D {0148}.    ABC155.  (1D).
 Xabc168-5A,B,D {0148}.    ABC168.  
 Xbcd21-5A,D {0148}.  [Xbcd307a,b-5B {0148}].  BCD21.  
 Xbcd307-5B.1,.2 [{0148}].    BCD307.  
 Xbcd881-5A,B,D {0148}.    BCD881.  
 Xbcd1427-5A,B,D {0148}.    BCD1427.  
 Xbcd1734-5A,B,D {0148}.    BCD1734.  
 Xcdo87-5A,B,D {0148}.    CDO87.  
 Xcdo385-5A,B,D {0148}.    CDO385.  
 Xcdo1475-5A,B {0148}.    CDO1475.  
 Xfbb166-5B {0148}.    FBB166.  (3B, 6A).
 Xgdm3-5D {0173}.    DMS F3/DMS R3..  
 Xgdm43-5D {0173}.    DMS F43/DMS R43.  
 Xgdm63-5D {0173}.    DMS F63/DMS R63.  
It is not clear whether Xgdm63-5D belongs to the group 5L or to the group 4AL:5BL:5DL.
 Xgdm68-5D {0173}.    DMS F68/DMS R68.  (5A,B).
 Xgdm99-5D {0173}.    DMS F99/DMS R99.  
 Xgdm116-5D {0173}.    DMS F116/DMS R116.  
 Xgdm138-5D {0173}.    DMS F138/DMS R138.  
 Xgdm153-5D {0173}.    DMS F153/DMS R153.  
 Xgwm497-5B [{0171}].  [Xgwm497d-5B {0171}].  WMS F497/WMS R497.  (1A, 2A, 3A,D).
 XksuG7-5A {446}^1^, 5D.1,.2 [{448}]^4^, {0148}^1^.  [XksuG7(A),(B)-5D {448}].  pTtksuG7.  (7A,B,D).
 XksuG57-5D {0148}.    pTtksuG57.  (2D).
 XksuP6-5A {0148}.    pTtksuP6.  
 XksuP10-5A {0148}.    pTtksuP10.  
 XksuP18-5A,B,D {0148}.    pTtksuP18.  
 XksuP20-5A,B,D {0148}.    pTtksuP20.  
 XksuP21-5A {0148}.    pTtksuP21.  
 XksuP23-5A,D {0148}.    pTtksuP23.  
 XksuP50-5A,B,D {0148}.    pTtksuP50.  
 XksuP64-5A,B,D {0148}.    pTtksuP64.  
 XksuQ10-5A,B,D {0148}.    pTtksuQ10.  
 XksuQ11-5A,B,D {0148}.    pTtksuQ11.  
 XksuQ13-5B,D {0148}.    pTtksuQ13.  
 XksuQ16-5A,B,D {0148}.    pTtksuQ16.  
 XksuQ24-5A,D {0148}.    pTtksuQ24.  
 XksuQ32-5A,B,D {0148}.    pTtksuQ32.  
 XksuQ34-5A,B,D {0148}.    pTtksuQ34.  
 XksuQ35-5A,B,D {0148}.    pTtksuQ35.  
 XksuQ45-5A.1,.2, B.1,.2, D [{0148}].  [XksuQ45a,b-5A,B {0148}].  pTtksuQ45.  
 XksuQ58-5A,B,D {0148}.    pTtksuQ58.  
 XksuQ59-5A,B,D {0148}.    pTtksuQ59.  
 XksuQ60-5A,B,D {0148}.    pTtksuQ60.  
 XksuQ61-5A,B,D {0148}.    pTtksuQ61.  
 XksuQ62-5A {0148}.    pTtksuQ62.  
 XksuQ63-5B,D {0148}.    pTtksuQ63.  
 XksuQ64-5B,D {0148}.    pTtksuQ64.  
 XksuQ65-5B,D {0148}.    pTtksuQ65.  
 XksuQ66-5B {0148}.    pTtksuQ66.  
 XksuQ67-5B {0148}.    pTtksuQ67.  
 Xkvl930(Pr1)-5A,D [{0148}].  [Pr1b-5A,D {0148}].  HvPr1b {00104}.  (7B,D).
 Xmgb1-5A,D {0148}.    MGB1.  
 Xmgb8-5A {0148}.    MGB8.  
 Xmgb10-5B {0148}.    MGB10.  
 Xmgb174-5A,B,D {0148}.    MGB174.  
 Xmgb191-5A,B,D {0148}.    MGB191.  (5AS).
 Xmgb301-5A,B,D {0148}.    MGB301.  
 Xmgb341-5B,D {0148}.    MGB341.  (5AS).
 Xmwg72-5A,B {0148}.    MWG72.  
 Xmwg76-5A,B,D {0148}.    MWG76.  
 Xmwg514-5A,B,D {0148}.    MWG514.  (6A,D).
 Xmwg549-5A,D {0148}.    MWG549.  (4A, 6D).
 Xmwg550-5A,B,D {0148}.    MWG550.  
 Xmwg516-5A,B,D {0148}.    MWG516.  
 Xmwg604-5A,B,D {0148}.    MWG604.  
 Xmwg716-5A,B,D {0148}.    MWG716.  (6D).
 Xmwg740-5A,B,D {0148}.    MWG740.  
 Xmwg805-5A,B,D {0148}.    MWG805.  
 Xmwg862-5B,D {0148}.    MWG862.  
 Xmwg933-5B {0148}.    MWG933.  
 Xpsr131-5A {0148}1, 5D {9926}^4^, {0148}^1^.    PSR131.  (2A,B,D).
 Xrz328-5A,B,D {0148}.    RZ328.  
 Xrz575-5A,B,D {0148}.    RZ575.  
 Xrz589-5A,B,D {0148}.    RZ589.  
 Xrz744-5A,B,D {0148}.    RZ744.  
 Xubp25-5B,D {0148}.    UBP25.  

4AL:5BL:5DL

Amendments:

Add:

 Xgdm118-5D {0173}.    DMS F118/DMS R118.  
 It is not clear whether Xgdm118-5D belongs to the group 4AL:5AL:5DL or to the group 7BS:5BL:5DL.
 Xgwm577-4A [{0177}].  [Xgwm577b-4A {0171}].  WMS F577/WMS R577.  (7B).
 It is not clear whether Xgwm577-4A belongs to the group 4AL:5AL:5BL or to the group 7AS:4AL:7DS.
 Xwmc262-4A,5B {01106}.    WMC 262F/WMC 262R.  

7BS:5BL:5DL

Amendments:

Group 5

Amendments:

Add:

 XgbxG103-5D [{0146}].  [XgbxG103b-5D {0146}].  gbxG103.  
 Xgdm68-5A {0173}.    DMS F68/DMS R68.  (5B,D).
 Xgdm68-5B {{0173}.    DMS F68/DMS R68.  (5A,D).
 Xgdm101-5B {0173}.    DMS F101/DMS R101.  
 Xgdm109-5A {0173}.    DMS F109/DMS R109.  
 Xgdm115-5B {0173}.    DMS F115/DMS R115.  (5D).
 Xgdm115-5D {0173}.    DMS F115/DMS R115.  (5B).
 Xgdm133-5B {0173}.    DMS F133/DMS R133.  (4D).
 Xgdm136-5D {0173}.    DMS F136/DMS R136.  
 Xgdm146-5B {0173}.    DMS F146/DMS R146.  
 Xgdm149-5B {0173}.    DMS F149/DMS R149.  
 Xgwm274-5B [{0171}].  [Xgwm274b-5B {0171}].  WMS F274/WMS R274.  (1B, 7B).
 Xgwm293-5B [{0171}].  [Xgwm293b-5B {0171}].  WMS F293/WMS R293.  (5A).
 Xgwm494-5D [{0146}].  [Xgwm494a-5D {0146}].  WMS F494/WMS R494.  (6A).
 Xwmc267-5A {0153}.    WMC 267F/WMC 267R {0160}.  

Group 6S

Amendments:

Add:

 Xgdm14-6D {0173}.    DMS F14/DMS R14.  
 Xgdm36-6D {0173}.    DMS F36/DMS R36.  
 Xgdm108-6D {0173}.    DMS F108/DMS R108.  
 Xgdm113-6B {0173}.    DMS F113/DMS R113.  (7A,B).
 Xgdm127-6D {0173}.    DMS F127/DMS R127.  
 Xgdm132-6D {0173}.    DMS F132/DMS R132.  
 Xgdm141-6D {0173}.    DMS F141/DMS R141.  (7B).
 Xgwm107-6B [{0171}].  [Xgwm107c-6B {0171}].  WMS F107/WMS R107.  (3B, 4B).


Group 6L

Amendments:

Add:

 Xcmwg664-6B,D {0081}.    cMWG664.  (6A).
 Xfbb95-6A,B,D {0081}.    FBB95.  
 Xgdm28-6A {0173}.    DMS F28/DMS R28.  (1B)
 Xgdm98-6D {0173}.    DMS F98/DMS R98.  
 Xgdm147-6B {0173}.    DMS F147/DMS R147.  
 Xgwm108-6B [{0171}].  [Xgwm108a-6B {0171}].  WMS F108/WMS R108.  (3B).
 Xgwm126-6B [{0171}].  [Xgwm126b-6B {0171}].  WMS F126/WMS R126.  (5A).
 Xgwm494-6A.2 [{0146}].  [Xgwm494b-6A {0146}].  WMS F494/WMS R494.  (5D, 6A).
 Xgwm582-6B [{0171}].  [Xgwm582a-6B {0171}].  WMS F582/WMS R582.  (1B, 2A).


Group 6

Amendments:

Add:

 Xgdm153-6B {0173}.    DMS F153/DMS R153.  
 Xwmc76-6B {0153}.    WMC 76F/WMC 76R {0161}.  
 Xwmc256-6A {0153}.    WMC 256F/WMC 256R.  (6D).
 Xwmc256-6D {0153}.    WMC 256F/WMC 256R.  (6A).
 Xwmc250-6D {01106}.    WMC 250F/WMC 250R.  
 Xwmc259-6B {01106}.    WMC 259F/WMC 259R.  
 Xwmc263-6B {01106}.    WMC 263F/WMC 263R.  

Group 7S

Amendments:

Add:

 Xgwm251-7A [{0171}].  [Xgwm251b-7A {0171}].  WMS F251/WMS R251.  (4B).
 Xgwm361-7B [{0171}].  [Xgwm361b-7B {0171}].  WMS F361/WMS R361.  (6B, 7BL).
 Xgwm631-7A.{0178}.    WMS F631/WMS R631.  

7AS:4AL:7DS

Amendments:

Add:

 Xgdm86-7D {0173}.    DMS F86/DMS R86.  (2B).
 Xgdm130-7D {0173}.    DMS F130/DMS R130.  

Group 7L

Amendments:

Add:

 Xgdm46-7D {0173}.    DMS F46/DMS R46.  
 Xgdm67-7D {0173}.    DMS F67/DMS R67.  
 Xgdm84-7D {0173}.    DMS F84/DMS R84.  
 Xgdm150-7D {0173}.    DMS F150/DMS R150.  
 Xgwm361-7B [{0171}].  [Xgwm361a-7B {0171}].  WMS F361/WMS R361.  (6B, 7BS).
 Xgwm550-7A [{0171}].  [Xgwm550b-7A {0171}].  WMS F550/WMS R550.  (1B).
 XksuH1-7B {0152}.    pTtksuH1.  (5A,D).

Group 7

Add:

 Xgdm142-7D {0173}.    DMS F142/DMS R142.  
 Xgdm152-7A {0173}.    DMS F152/DMS R152.  
 Xgwm376-7A [{0171}].  [Xgwm376c-7A {0171}].  WMS F376/WMS R376.  (1A, 3B).
 Xgwm601-7A [{0171}].  [Xgwm601b-7A {0171}].  WMS F601/WMS R601.  (4A).
 Xwmc47-7A {0153}.    WMC 47F/WMC 47R {0154}.  
 Xwmc83-7A {0153}.    WMC 83F/WMC 83R {0161}.  
 i {0153}.    WMC 216F/WMC216R {0158}.  


Dormancy (seed)

Add at the end of the section:
'Several QTLs for falling number and a-amylase activity, two indicators for preharvest-sprouting resistance, were identified in {0169}. The most significant were associated with Xglk699-2A and Xsfr4(NBS)-2A, Xglk80-3A and Xpsr1054-3A, Xpsr1194-5A and Xpsr918-5A, Xpsr644-5A and Xpsr945-5A, Xpsr8(Cxp3)-6A and Xpsr563-6A, and Xpsr350-7B and Xbzh232(Tha)-7B [{0169}].'


Earliness per se

EpsWi. Replace the current v: listing with: 'su: Cheyenne*7/ Wichita 3A {0025}'. ma: Linked to QTLs for plant height, kernel number per spike, and 1,000-kernel weight in RSLs derived from CNN/CNN(WI3A) {0025}.
QTL : Analysis in Courtot/CS {0132}.


Gametocidal Genes
1. Gametocidal activity

Gc1-C1 {0188}. 2CL {0189}. ad: CS/2C {0189}. su: CS2C(2A), CS2C(2B), CS2C(2D) {0189}.

Insert after the first paragraph:
'Gametocidal genes in chromosomes in the same homoeologous group have the same gametocidal action {0190}. In monosomic additions of chromosomes with gametocidal effects, chromosome deletions and translocations are produced in gametes not having the gametocidal genes. This feature has been exploited to isolate genetic stocks suitable for physical mapping of wheat {0191} chromosomes, and of rye {0192} and barley {0193,0194,0195} chromosomes in a wheat background.'.

Glaucousness (Waxiness/Glossiness)

Add at the end of the section:
'A gene for spike glaucousness, Ws, was mapped distally on the short arm of chromosome 1B in the cross 'T. durum cv. Langdon / T. dicoccoides acc. Hermon H52 {0171}'.'

 

Epistatic Inhibitors of Glaucousness

Insert prior to last sentence: 'A nonglaucous spike phenotype present in line L-592, a 7S(7A) substition line, is described in {0113}.'.

Grain Hardness / Endosperm Texture
To be inserted in a reorganised section:
'QTL : In a DH population of 'Courtot/CS', a major locus in chromosome 5DS coincided with Ha; minor QTLs mapped in chromosomes 1A (associated with Xfba92) and 6D (associated with Xgwm55) {0141}.'.


Grain Quality Parameters
1. Sedimentation value

2. Flour colour
Transfer from previous location following DNA section (1999 Supplement) and replace section with:
'QTL : A QTL was detected on chromosome 7A {9936}. Cultivar Schomburgk contributed the yellow colour allele in a cross 'Schomburgk/Yarralinka' {9936}. Markers Xcdo347-7A and Xwg232-7A accounted for 60 % of the genetic variation {9936}. A Sequence Tagged Site PCR marker is available {0180}. Other references to flour colour are given under Lr19 and Sr25.'.

3. Amylose content
Replace previous section: Amylose content has a significant effect on industrial quality; for example, reduced amylose wheats have better performance in some types of noodles. The waxy protein genes have an important influence, but other genes are also involved.
QTL : QAmc-ocs.4A.1 was located in a Xbcd1738 - Xcdo1387 segment in chromosome 4AS of Kanto 107 relative to CS {0047}.

4. Milling yield
QTL :
A QTL was detected on chromosome 3A {0181}. Cultivar Schomburgk contributed the higher milling yield allele in a cross 'Schomburgk/Yarralinka' {0181}. RFLP markers Xbcd115 and Xpsr754 were associated with this QTL at LOD > 3 {0181.}.

5. Alveograph dough strength W
QTL :
QTLs for W were detected on chromosome arms 5DS (associated with Xmta10), 1AS (associated with Xfba92), and 3B (associated with XksuE3) in a cross 'Courtot/Chinese Spring' {0141}. The first two QTLs coincided with those for hardness.

 

Grain Weight
QTL:
Variation at locus QGw1.ccsu-1A, associated with Xwmc333-1A, accounted for 15 % of the variation in a RIL population from RS111/CS {0143}.

Height

QTL : Two QTLs for plant height were assigned to chromosome 3A in RSLs from 'Cheyenne*7/Wichita 3A substitution line' {0025}.
Seven QTLs on chromosomes 1A, 1D, 2B, 2D, and 4B affected plant height among RILs of 'CS/T. spelta duhamelianum'. Effects linked with the CS alleles of Xbcd1160-1A, Xksu127-1D, and XksuF11-2D increased height, whereas those CS alleles associated with Xpsr131-2B, Xpsr135-2B, Xpsr934-2D, and Xcs22.2-4B reduced it {0196}.

Hybrid Weakness
1. Hybrid necrosis
Add to genotype list: {0112}.

 

Meiotic Characters
2. Pairing homoeologous

Ph1b. ma : A PCR-based detection system for ph1bph1b individuals is described in {9965}.


Proteins

1. Grain Protein Content

QTLs for grain protein content were detected on chromosome arms 6AS (associated AFLP marker, XE38M60v200v) and 1BL (associated RFLP marker, Xcdo1188) in 'Courtot/Chinese Spring' {0141}.

QGpc.ndsu-6Bb v: Glupro {0179}. ma : Flanking microsatellite markers and PCR-specific markers are available {0179}.

3. Endosperm Storage Proteins

3.1. Glutenins
Add below Glu-A1-1c in the Glu-A1-1 section:
'A PCR marker specific for the Glu-A1-1c (Ax2*) allele was developed in {0147}.'

Add below Glu-B1-1a in the Glu-B1-1 section:
'A PCR marker (2,373 bp) for the Glu-D1-1a (Bx7) allele was developed in {0145}.'

Add below Glu-D1-1d in the Glu-D1-1 section:
'PCR markers specific for the Glu-D1-1d (Dx5) allele were developed in {0145} and {0147}.'

Add below Glu-D1-2a in the Glu-D1-2 section:
'A PCR marker (612 bp) for the Glu-D1-2a (Dy12) allele was developed in {0145}.'

Add below Glu-D1-2b in the Glu-D1-2 section:
'PCR markers (576 bp and 2,176) for the Glu-D1-2b (Dy10) allele were developed in {0145} and {0147}, respectively.'

Between the Glu-A1 allelic list and the text beginning 'There is a possibility that Glu-A1 alleles i, j {1527} and k {478} correspond to alleles', insert the paragraph:
'The importance of the HMW-glutenin subunits for bread-making quality was first noted from observations in wheat cultivars of related pedigree on the effects of the presence of subunit 1 encoded by Glu-A1a {0197}, effects that have repeatedly been confirmed since (for example {0198,0199,01100}).'

After the end of the paragraph that closes the Glu-3 (LMW glutenin) section ('The Glu-3 loci can be recognised with pTag544 {49} and pTdUCD1 {167} and by specific microsatellite primers {252}.'), add the paragraph:
'PCR amplification of genomic DNA has been used to isolate three LMW-glutenin genes in the cultivar Chinese Spring, named LMWG-MB1, LMWG-MB2, and LMWG-MB3 {01101}. The deduced amino-acid sequences showed a high similarity between these ORFs and with those of other LMW-glutenin genes. The authors state that the study provided direct evidence that insertions and/or deletions provide a mechanistic explanation for the allelic variation and, hence, the resultant evolution, of prolamin genes, and comment on relationships with g-secalins and b-hordein families. Single-base substitutions at identical sites generate premature stop codons in both LMWG-MB2 and LMWG-MB3, indicating that these clones are pseudogenes.'

3.2. Gliadins

Before the final paragraph of the preamble (which now reads, after an amendment included in the 1999 Supplement: 'The Gli-1 loci may be recognised by probes pcP387 {372} and pTag1436 {065} and by specific microsatellite primers {252}. Furthermore, it has been shown that probe pTag1436 differentiates gliadin alleles rather well; using this probe, families of gliadin alleles and some of their relationships have been described {9988}.')
Insert the paragraph:
'Based upon morphological observation and RFLP analysis, it has been proposed that the cultivar 'Chinese Spring' is a strain of the landrace 'Chengdu-guangtou' from the Chengdu Plain, Sichuan Province; this proposal is supported by the observation that the cultivar and landrace share the same alleles at all nine Gli-1, Gli-2 and Glu-1 loci {see 01102}.'

After the final paragraph of the preamble (as given above), add the paragraphs:
'PCR primers GAG5 and GAG6 were applied to 35 cultivars of closely related spelt and hexaploid wheat, and to eight cultivars of durum wheat, to yield products originating from two g-gliadin genes mapped to chromosomes 1B (termed GAG56B) and 1D (termed GAG56D) {01103}. Two alleles for GAG56D (differing in a 9-bp deletion/duplication and single nucleotide polymorphism) were found, one a new allele and the other previously published {01104}. Meanwhile, two alleles found for GAG56B among the durum wheats correlated with the presence of gluten quality markers g-gliadins 42 or 45.

1B and 1D sulphur-poor w-gliadins in cultivar Butte 86 were characterised by RP-HPLC, SDS-PAGE, two-dimensional PAGE, amino acid composition determination and sequencing, matrix assisted laser desorption ionisation - time of flight mass spectrometry, and circular dichroism spectroscopy to reveal the detailed nature of the peptides belonging to the two groups, and showing that the complexity of mixture of the peptides of the 1B group was greater than that of the 1D group {01105}. Although circular dichroism spectra were similar for the two groups of peptides and suggested a mainly flexible random structure, there was evidence for a significant amount of left-handed polyproline II helical conformation in the case of the 1D components. The authors placed some of the results in the context of the possible ancestor of the B genome and relationships with the barley C-hordeins and rye w-secalins'


4. Enzyme inhibitors (previously, protease inhibitors)
4.4. Inhibitors (dimeric) of heterologous a-amylases

Chromosome 3BS has duplicated loci controlling two dimeric inhibitors of exogenous a-amylases, one known as 0.53 or Inh I {1260} and the other as WDA I-3 {1260}. Chromosome 3DS has a homoeologous locus controlling a dimeric inhibitor of exogenous a-amylases, known as 0.19 or Inh III {1260,0124}, that is closely related to 0.53/Inh I. Intervarietal polymorphism for the WDA-3 protein was identified by isoelectric focussing of water-soluble endosperm proteins {0124}. This was interchromosomely mapped on 3BS using both a DH population of 'Cranbrook/Halberd', and a set of RILs of 'Opata 85/W-7984' (ITMI population) {0125}.

Iha-B1.1 {1260}. 3BS {1260}. v : CS {1260}.
Iha-B1.2 {0124}. 3BS {0124}. v : CS {0124}.
Iha-B1.2a {0124}. v : CS {0124,0125}.
Iha-B1.2b {0125}. Null allele. v : Cadoux {0125}; Cranbrook {0125}; Tasman {1260}.
Iha-D1 {1260}. 3DS {1260}. v : CS {1260}.

5. Other proteins

5.6. Waxy Proteins

Wx-A1. At end of section add: Variation in the microsatellite gene Xsun1-7A provides a codominant marker for this locus {0116}.
Wx-A1b. tv : Asrodur {0111}.
Wx-B1b. tv : Blaquetta (BG-13701) {0111}.
Wx-B1f {0111}. tv : BG-12413 {0111}; BG-12415 {0111}.
Wx-D1b {0116}. At end of section add : ma : Microsatellite marker Xsun1-7D is absent in wheats with this allele {1116}; Xsun4(Wx)-7D is a perfect marker {0118}.
Wx-D1d {0118}. : K107wx1 {0118}; EMS mutants {0118}.
Wx-D1e {0117}. Null allele {0117}. v : NP150 {0117}.

Add {0144} to genotype list.

Add at the bottom of the section:
'Isolation of a wheat cDNA encoding Wx-A1 and Wx-D1 was reported in {0123} and {0167}, respectively. Isolation of genomic sequences for the genes encoding granule-bound starch synthase (GBSSI or Wx) in T. monococcum, Ae. speltoides, and Ae. tauschii was reported in {0168}. Cloning of a second set of GBSS or waxy genes, GBSSII, which were shown to be located on chromosomes 2AL, 2B, and 2D, was reported in {0167}.

5.7. Starch granule proteins

At end of section for Sgp-1 add: 'A triple null stock (SGP-1 null wheat) is reported in {0137}.'.

 

5.8. Puroindolines

To sentence: 'Present only in some hard wheats' in 2000 Supplement add: 'Pina-D1b is associated with harder texture than Pinb-D1b {0177}.'.

Red Grain Colour
Add at end of section: 'See also Variegated Red Grain Colour'.

 

Response to Photoperiod
QTL :
A QTL was detected in chromosome 4BS in Courtot/CS {0132}.

 

Response to Vernalization
QTL :
Analysis in Courtot/CS {0132}.

 

Variegated Red Grain Colour
Add at end of section: 'Variegated red pericarp was also studied in crosses of cv. Supreme. In this case, two red colour genes were present {0136}.

Yield Components
1,000-grain weight
QGw1.ccsu-1A {0165}. 1AS {0165}. v : RS111/CS mapping population {0165}. ma : Associated with Xwmc333-1A {0165}.
QTL : Two QTLs for 1,000-kernel weight were assigned to chromosome 3A in RSLs from 'Cheyenne*7/Wichita 3A' {0025}.

Spike number/sq. metre
QTL :
A QTL for spike number/sq. meter was assigned to chromosome 3A in RSLs from 'Cheyenne*7/Wichita 3A' {0025}.

Kernel number/spike
QTL :
Three QTLs for kernel number/spike were assigned to chromosome 3A in RSLs from 'Cheyenne*7/Wichita 3A' {0025}.

Spike length
QTL :
Five QTLs for spike length were detected in 'Courtot/Chinese Spring' {0114} but only one on chromosome arm 5AL was consistent for at least 2 years.

Spikelet number/ear
QTL :
Three QTLs for spike length were detected in 'Courtot/Chinese Spring' {0114} but only two on chromosome arms 2AS and 2BS were consistent for at least 2 years.


Pathogenic Disease/Pest Reaction

Reaction to Barley Yellow Dwarf Virus

Bdv2. 7DL= T7DS.7DL-7Ai#1L {0182}. tr: H960642 {0182}. ma : Distal 10 % of 7DL, translocation point between RFLP markers Xpsr680 and Xpsr965 {0182}.

Reaction to Diuraphis noxia

Dn5. ma : A SCAR marker developed from the RAPD fragment OPF141083 mapped 5.5 cM proximal to Dn5 {0172}.


Reaction to Erysiphe graminis

Pm6. i: 6 NILs based on Prins {0139}. ma : Pm6 was mapped to the interval Xbcd135-2B - Xpsr934-2B {0139}. However, the fact that Timgalen and a 'CI12632/Cc' line lacked the critical T. timopheevii markers {0139} is cause for concern.

ma: close linkage with Xbcd135 (1.5 + 1.4 cM), Xbcd307 (4.7 + 2.5 cM) and Xbcd266 (4.5 + 2.4 cM) {0069}.
Pm8. Add just before 'crosses between three lines ': 1BS/1RS recombinants 2.9 cM proximal to Gli-B1/GluB3 {0084}. i: MA1 and MA2 four-breakpoint double translocation lines 1RS-1BS-1RS-1BS.1BL in Pavon {0084}.'
Pm13. ma : STS marker Xutv13 {0036}; several other markers located in introgressed segments {0036}.
Add at the end of the section: 'ma: Pm13 was mapped to a translocated 3S^l^S segment distal to Xcdo460-3B {0036}.
Pm24. Add : 'Although Pm24 had previously been located to chromosome 6D {571}, Pm24 was mapped on chromosome arm 1DS in the cross 'Chinese Spring (susceptible)/Chiyacao (resistant)' {0150}.
Pm29. {0129}. v : Pova {0129}. ma : Location confirmed with molecular markers {0129}.
Pm30 {0163}.5BS {0163}. v : 87-1/C20//2*8866 selections {0163}. tv : T. dicoccoides accession C20 {0163}.
Mlre. 6AL {0142}.
Add at the end of the sentence: 'Mlre showed a residual effect on the quantitative expression of APR in the presence of E. graminis pathotypes considered virulent for Mlre in standard seedling tests {0016}.':
'In addition to the Mlre gene on chromosome arm 6AL, a QTL for resistance effective at the seedling stage was identified on chromosome 5D in {0146}. The QTL was associated with microsatellite marker Xgwm174-5D.'.


Reaction to Fusarium graminearum

Replace previous section:
QFhs.ndsu-2A {9925,0175}. 2AL {9925}. v : Stoa {0081}. ma : Associated with XksuH16-2A (LOD > 3) {0175}.
QFhs.ndsu-3B {9925,0175}. 3BS {9925}. v : Sumai 3 {9925, 0175}. ma : Associated with Xbcd907-3B.2 (LOD > 3) {9925} and microsatellite markers Xgwm533 and Xgwm493 {0175}.
Add at the bottom of the section:
'Two major genes with additive effects were reported in crosses between Sumai 3 (resistant) and two susceptible cultivars {0174}. One of the genes was assigned to 5AL based on linkage to the dominant awn suppressor B1 (RF 15.1 ­ 21.4 %).'.

Reaction to Heterodena avenae

Cre2 {238}. v : Replace H93-8 {238} with 'H-93-8 Cre6 {238}'.
Cre5
{0107}. Derived from Aegilops ventricosa {0107,0009}. CreX {0009,0183}. 2AS{0107}=2A-2Nv-6Nv. v : VPM1 {0107}. Many VPM1 derivatives {0107}. Notable exceptions of lines with Lr37, Sr38, and Yr17, but lacking Cre5 include Trident and Line L22 {0107}. su : Moisson 6Nv(6D) {0183}. dv : Ae. ventricosa 10 {0183}. Two resistance gene analogues similar to the candidate gene Cre3 were isolated from the Ae. ventricosa segment carrying Cre5 {0183}.
Cre6
{0138}. Derived from Aegilops ventricosa {0138}. 5Nv {0138}. ad : Moisson + 5Nv {0138}. v : H-93-35 {0138}; H-93-8 Cre2 {0138}.
Cre7
{0104}. CreAet{0105}. Derived from Aegilops triuncialis {0105}. v : TR353 derivatives {0105}.
CreR
{0133}. 6RL {0133}. su : CS + 6R(6D) {0133}. al : Rye accession T701-4-6 {0133}. ma : Cent.......XksuF37 - 3.7cM - CreR {0133}.

Reaction to Meloidogyne spp.

Rkn-mn1 {1621}. Derived from Aegilops variabilis {1621}. v : X8 = 'CS/Ae. variabilis No 1//Rescler/38*Lutin' {1620} ; X35 {1620,1621}. ma : Cosegregation with RAPD OpY161065 and close linkage with several markers including Est-B5 {0103}.

Reaction to Mycosphaerella graminicola
Stb5
{0186}. Identified using M. graminicola culture IPO94269 {0186}. Derived from Aegilops tauschii accession 37-1 {0186}. 7DS {0186}. su : CS*8/(Syn7D) {0186}. v : Sear's Synthetic {0186}.
Stb6 {0187}. Confers resistance to M. graminicola isolate IPO323 but not to isolate IPO94269 {0187}. 3AS {0187}. v : Flame {0187}.

 

Reaction to Pratylenchus spp.
Disease: Root lesion nematode; prats

1. Reaction to Pratylenchus neglectus
Rlnn1
{0121}. 7AL {0121}. v : Excalibur {0121}; Krickauff {0121}.

2. Reaction to Pratylenchus thornei
QTLs were located on chromosomes 2BS and 6DS {0122}.

Reaction to Puccinia recondita

Lr19. Add to ma : ' The following gene order for the Thinopyrum segment is given in {0101} : Cent - Sd1 - Xpsr165 - Xpsr105 - Xpsr129 - XcsIH81-1 - Xwg380 - Xmwg2062 - Lr19 - Wsp-D1 - Sr25/Y.'.
Lr37.
A resistance gene analog containing an NBS-LRR R gene sequence was isolated from the Ae. ventricosa segment carrying Lr37 {0183}.
Lr46.
1BL {0119}. v : Pavon F76 Lr1 Lr10 Lr13 {0119}. Lr46 is completely linked with Yr29 {0119}.
Lr47.
Modify and add to earlier sentence: 'Complete linkage with several RFLP {9901} and PCR specific markers {0126}.'.

To genotype list, for Czeckoslovakian cultivars add reference {0102} to {855}, i.e., '{855,0102}'.


Reaction to Puccinia striiformis

Yr15. ma : Xgwm33-1B - 4.5cM - Yr15 - 5.6cM - UBC199200 - 5.6cM - Nor-B1 {0110}.
Yr28
ma :
Close association witk Xmwg634-4DS {1377}.
Yr29
{0119}. Adult plant resistance {0119}. 1BL {0119}. v : Pavon F76 Yr6 Yr7 Yr30 {0119}. Yr29 is completely linked with Lr46 {0119}.
Yr30
{0120}. Adult plant resistance {0120}. 3BS {0120}. v : Opata 85 {0120}; Parula {0120}. Inia 66 YrA {0120}. Pavon F76 Yr6 Yr7 Yr29 {0120}. Yr30 is closely linked with Sr2 and Lr27 {0120}.
YrH52.
ma :
 Xgmw273a - 2.7cM - YrH52 - 1.3cM - Xgwm413/Nor1.......centromere {0108}.

 

Reaction to Tilletia caries (D.C.) Tul., T. foetida (Wallr.) Liro, T. controversa

Bt10. v : Add to Others : '{0128}'. ma : Add at the end : 'The RAPD fragment was sequenced and converted to a diagnostic PCR marker for Bt10 in {0151}.'.

Reaction to Wheat Spindle Streak Mosaic Bymovirus (WSSMV)

QTL : 79 % of the variation between Geneva (resistant) and Augusta (susceptible) was associated with markers Xbcd1095-2D and Xcdo373-2D located 12.4 cM apart in chromosome 2DL {0131}.



GENETIC LINKAGES2DS - {0062}.


 Chromosome 1D
  Pm22  - Pm24     I {0150} 

 Chromosome 3A
 Br2  -  R-A1b   4.2 cM {0130} 
 Br3  -   R-B1b    47.0 cM {0130}

 Chromosome 6B
 Amp-B2  -  R-B2   0.9 % {0176}
 Amp-B2  -   R-B2    2.1 % {0176}




Additions to Summary Table 1

 Amc  Amylose content
 Gw  Grain weight
 Iha  Inhibitor (dimeric) of heterologous a-amylase
 Plnn  Reaction to Pratylenchus neglectus
 Plnt  Reaction to Pratylenchus thornei

 

REFERENCES

Amendments.

Deletion.

New.