| Loci | Primer Sequences (5' to 3') | Repeat | Chromosome |
| HVM2A | F-CAGGTGTCTAGTGGGTGCCT
R-TTACATACCAAGGAGCAATCCC |
(GA)11 |
7 |
| HVM3+ | F-ACACCTTCCCAGGACAATCCATTG
R-AGCACGCAGAGCACCGAAAAAGTC |
(AT)29 |
4 |
| HVM4+ | F-AGAGCAACTACCAGTCCAATGGCA
R-GTCGAAGGAGAAGCGGCCCTGGTA |
(AT)9 |
1 |
| HVM5 | F-AACGACGTCGCCACACAC
R-AGGAACGAAGGGAGTATTAAGCAG |
(GT)6,(AT)16 |
1 |
| HVM6 | F-CATGAATGAATGATTGGTTTTG
R-CGCATCCGTATGTATGAGTAA |
(GA)9 |
7 |
| HVM7+ | F-ATGTAGCGGAAAAAATACCATCAT
R-CCTAGCTAGTTCGTGAGCTACCTC |
(AT)7 |
7 |
| HVM9+ | F-CTTCGACACCATCACCCAG
R-ACCAAAATCGCATCGAACAT |
(TCT)5 |
3 |
| HVM11 | F-CCGGTCGGTGCAGAAGAG
R-AAATGAAAGCTAAATGGGCGATAT |
(GGA)3,(GGA)
(GGA)2 |
6 |
| HVM13 | F-AGTAGCTATGTGTTTGGATCGC
R-CATCAAGGGCATCCTCATG |
(GA)6,(GA)6,
(GA)6 |
4 |
| HVM14 | F-CGATCAAGGACATTTGGGTAAT
R-AACTCTTCGGGTTCAACCAATA |
(CA)11 |
6 |
| HVM15 | F-TCATAACCACGGCGTCCT
R-CGTGACTGGAAACCCTGC |
(GA)8 |
3 |
| HVM20 | F-CTCCACGAATCTCTGCACAA
R-CACCGCCTCCTCTTTCAC |
(GA)19 |
5 |
| HVM22 | F-TTTTGGGGGATGCCTACATA
R-TTTCAAATGGTTGGATTGGA |
(AC)13 |
6 |
| HVM23 | F-TCGGTGAAGAAATACGAGGC
R-TCTTTGTAGACCTACCGGTCC |
(GA)9 |
2 |
| HVM26 | F-GGCTATCACATTTGGTACCATC
R-GCATGTGTAGGTGTTGGTGG |
(CA)11 |
2 |
| HVM27 | F-GGTCGGTTCCCGGTAGTG
R-TCCTGATCCAGAGCCACC |
(GA)14 |
3 |
| HVM30 | F-AGTGGGGAATGAGAGAATGG
R-TGCTTGTGGGTCATCACAC |
(CA)8 |
7 |
| HVM31 | F-CGGTTTCTGGTTGCTTGG
R-CGAAGGTCTCAGGCTTCATG |
(AC)9 |
6 |
| HVM33 | F-ATATTAAAAAAGGTGGAAAGCC
R-CACGCCCTCTCCCTAGAT |
(CA)7 |
3 |
| HVM34 | F-ACCATGTTGCGTGTTGCTT
R-CGGTTCGAAATCGAGTGG |
(GA)10 |
6 |
| HVM36 | F-TCCAGCCGAACAATTTCTTG
R-AGTACTCCGACACCACGTCC |
(GA)13 |
2 |
| HVM40 | F-CGATTCCCCTTTTCCCAC
R-ATTCTCCGCCGTCCACTC |
(GA)6(GT)4
(GA)7 |
4 |
| HVM43 | F-GGATTTTCTCAAGAACACTT
R-GCGTGAGTGCATAACATT |
(CA)9 |
5 |
| HVM44 | F-AAATCTCAGGTTCGTGGGCA
R-CCACGGAGACCACCTCACTT |
(GA)8 |
3 |
| HVM49 | F-CTCTATAGGCACGAAAAATTCC
R-TTGCACATATCTCTCTGTCACA |
(CA)12 |
1 |
| HVM50 | F-TGAAGAAGCCCTCCGTATTC
R-TGCTCAAGGCTCTAGGCTGA |
(GA)9 |
2 |
| HVM51 | F-TCTAAATTACCTTCCCAGCCA
R-AAAGCAGACATGTAGGAGGTCA |
(GA)3(GGGA)3
(GA)8 |
1 |
| HVM54 | F-AACCCAGTAACACCGTCCTG
R-AGTTCCCTGACCCGATGTC |
(GA)14 |
2 |
| HVM60 | F-CAATGATGCGGTGAACTTTG
CCTCGGATCTATGGGTCCTT |
(AG)11,(GA)14 |
3 |
| HVM62 | F-TCGCGACCAGACGAGAAG
R-AGCTAGCCGACGACGCAC |
(GA)11 |
3 |
| HVM63 | F-CGCGCAAGCATGAATACTC
R-ACTCACAAGTGGCGCGTAC |
(GA)9 |
5 |
| HVM64 | F-GATGTGAAGGCTGCCCTG
R-ACACGCCCTATTACCCAGTG |
(GA)4(GT)7
(CT)2(GT)4(GA)8 |
5 |
| HVM65 | F-AGACATCCAAAAAATGAACCA
R-TGGTAACTTGTCCCCCAAAG |
(GA)10 |
6 |
| HVM67 | F-GTCGGGCTCCATTGCTCT
R-CCGGTACCCAGTGACGAC |
(GA)11 |
4 |
| HVM68 | AGGACCGGATGTTCATAACG
R-CAAATCTTCCAGCGAGGCT |
(GA)22 |
4 |
| HVM70 | F-CCGCCGATGACCTTCTC
R-ACCCACGACCTATGGCAC |
(CA)8 |
3 |
| HVM74 | F-AGGAAGTCATTGCGTGAG
R-TGATCAAGAATGATAACATGG |
(GA)13 |
6 |
| HVM77 | F-GAAATTTGGTGTATGATGGTT
R-CAAATCTTAAATCTCTCTGTTT |
(CA)7 |
4 |
| HVBKASI* | F-ATTGGCGTGACCGATATTTATGTTCA
R-CAAAACTGCAGCTAAGCAGGGGAACA |
(C)10,(A)11 |
2 |
| HVCMA* | F-GCCTCGGTTTGGACATATAAAG
R-GTAAAGCAAATGTTGAGCAACG |
(AT)9 |
1 |
| HVCSG* | F-CACTTGCCTACCTCGATATAGTTTGC
R-GTGGATTCCATGCATGCAATATGTGG |
(CA)4,(C)17 |
2 |
| HVDHN7* | F-TTAGGGCTACGGTTCAGATGTT
R-ACGTTGTTCTTCGCTGCTG |
(AAC)5 |
7 |
| HVDHN9* | F-CATGGACAAGATCAAGGAGAAG
R-CCCATTATTTATCTGTAGGAACGC |
(AC)6 |
7 |
| HVLEU* | F-TTGGAAGTGTACAGCAATGGAG
R-TGAAAGGCCCACAAGATAG |
(ATTT)4 |
7 |
| WMS6** | F-CGTATCACCTCCTAGCTAAACTAG
R-AGCCTTATCATGACCCTACCTT |
(GA)40 |
4 |
(Primers Available from: Research Genetics, Inc.)
|
+Sequence according to: Saghai Maroof, et al; 1994; Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations, and population dynamics. Proc. Natl Acad Sci USA 91:5466-5470 |
|
Sequence according to: Z. Liu, et al; 1996; Development of simple sequence repeat DNA markers and their intergration into a barley linkage map. Theor. Appl. Genet. 93:869-876 |
|
*Sequence according to: Becker, J. and Heun, M. 1995. Barley microsatellites: allele variation and mapping. Plant Mol Biol 27:835-845. |
|
**Sequence according to: Roder, M.S., Plaschke, J., Konig, S.U., Borner, A., Sorrells, M.E., Tanksley, S.D., and Ganal, M.W. 1995. Abundance, variability and chromosomal location microsatellites in wheat. Mol. Gen. Genet. 246: 327-333. |