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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, MxN, genetic 2005
(Reference Set)
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Maps Oat-MxN_2005-25
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, MxN, genetic 2005 [ View Map Set Info ]
Map Name: Oat-MxN_2005-25
Map Start: 0
Map Stop: 11.6
Features by Type:
2 locus
2 Total

Map Features

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Items 1 to 2 of 2.
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-25
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
og41 locus 0 Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 OG41 locus 15 (cM) Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_32 OG41 locus 2 () Automated name-based View Maps
Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_3-38 OG41 locus 15 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-3+38 og41 locus 5.46 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_1_3_38_X4 OG41 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2013-MxN-RGA - Oat-2013-MxN-RGA_MN25 og41 locus 0 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-38 Xog41 locus 5.6 () Automated name-based View Maps
p35m68n2 locus 11.6 Oat - Oat-2013-MxN-RGA - Oat-2013-MxN-RGA_MN25 p35m68n2 locus 11.6 (cM) Automated name-based View Maps

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