*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, MxN, genetic 2005
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-MxN_2005-20
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, MxN, genetic 2005 [ View Map Set Info ]
Map Name: Oat-MxN_2005-20
Map Start: 0
Map Stop: 10
Features by Type:
2 locus
2 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 2 of 2.
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-20
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
cdo456 locus 0 Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-B Xcdo456 locus 0 () Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_14 cdo456 locus 10 (cM) Automated name-based View Maps
Oat - Oat-2013-MxN-RGA - Oat-2013-MxN-RGA_MN20 cdo456 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_9 CDO456 locus 13.5 (cM) Automated name-based View Maps
Rice - Rice, BxOl - Rice-CU-4 cdo456 locus 100 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-9 cdo456 locus 13.5 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg13 CDO456 locus 114.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 CDO456 locus 114.6 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_9 CDO456 locus 24 (cM) Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO9 cdo456 locus 14 (cM) Automated name-based View Maps
p48m58m1 locus 10 Oat - Oat-2013-MxN-RGA - Oat-2013-MxN-RGA_MN20 p48m58m1 locus 10 (cM) Automated name-based View Maps

GrainGenes is a product of the US Department of Agriculture.