*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2017-UTauxU017
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2017-UTauxU017-24
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2017-UTauxU017 [ View Map Set Info ]
Map Name: Oat-2017-UTauxU017-24
Map Start: 0 cM
Map Stop: 10.98 cM
Features by Type:
8 locus
8 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 8 of 8.
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-24
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GMI_ES01_c4114_253 locus 0 No other positions
GMI_ES15_c2877_179 locus 0.3 Oat - Avena_2013_SNP - Avena_2013_SNP_20D GMI_ES15_c2877 locus 38.6 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_9 GMI_ES15_c2877_179 locus 39.7 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg13 GMI_ES15_c2877_179 locus 49.5 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_26 GMI_ES15_c2877_179 locus 43.25 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_ES15_c2877_179 locus 49.5 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_21 GMI_ES15_c2877_179 locus 41.7 () Automated name-based View Maps
GMI_DS_CC5507_90 locus 2.1 Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_DS_CC5507_90 locus 58.6 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg13 GMI_DS_CC5507_90 locus 58.6 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_20D GMI_DS_CC5507 locus 45.01 () Automated name-based View Maps
Oat - Oat-2016-OxP - Oat-2016-OxP_2 GMI_DS_CC5507_90 locus 49.2 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_9 GMI_DS_CC5507_90 locus 51.7 () Automated name-based View Maps
GMI_ES_CC7805_275 locus 3.28 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_26 GMI_ES_CC7805_275 locus 48.72 (cM) Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_14 GMI_ES_CC7805_275 locus 0 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_9 GMI_ES_CC7805_275 locus 51.7 () Automated name-based View Maps
Oat - Avena_2013_SNP - Avena_2013_SNP_20D GMI_ES_CC7805 locus 47.59 () Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_21 GMI_ES_CC7805_275 locus 47.2 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg13 GMI_ES_CC7805_275 locus 57.3 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_ES_CC7805_275 locus 57.3 () Automated name-based View Maps
GMI_ES14_c18894_685 locus 4.46 Oat - Oat-2016-AxM - Oat-2016-AxM_21 GMI_ES14_c18894_685 locus 48.2 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_19 GMI_ES14_c18894_685 locus 44.9 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg13 GMI_ES14_c18894_685 locus 59.4 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_ES14_c18894_685 locus 59.4 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_14 GMI_ES14_c18894_685 locus 2.4 () Automated name-based View Maps
Oat - Oat-2016-HxZ - Oat-2016-HxZ_ss16 GMI_ES14_c18894_685 locus 56.7 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_9 GMI_ES14_c18894_685 locus 51.7 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_26 GMI_ES14_c18894_685 locus 49.65 (cM) Automated name-based View Maps
Oat - Oat-2020-CORE-BG - Oat-2020-CORE-BG_Mrg13 GMI_ES14_c18894_685 locus 59.4 (cM) Automated name-based View Maps
GMI_ES15_c19934_713 locus 4.75 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_26 GMI_ES15_c19934_713 locus 49.65 (cM) Automated name-based View Maps
Oat - Oat-2020-CORE-BG - Oat-2020-CORE-BG_Mrg13 GMI_ES15_c19934_713 locus 59.4 (cM) Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_21 GMI_ES15_c19934_713 locus 48.2 () Automated name-based View Maps
Oat - Oat-2016-HxZ - Oat-2016-HxZ_ss16 GMI_ES15_c19934_713 locus 56.7 () Automated name-based View Maps
Oat - Oat-2016-OxP - Oat-2016-OxP_2 GMI_ES15_c19934_713 locus 51.9 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg13 GMI_ES15_c19934_713 locus 59.4 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_9 GMI_ES15_c19934_713 locus 51.7 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_19 GMI_ES15_c19934_713 locus 44.9 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_ES15_c19934_713 locus 59.4 () Automated name-based View Maps
GMI_ES05_c10205_390 locus 5.33 Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_26 GMI_ES05_c10205_390 locus 50.59 (cM) Automated name-based View Maps
Oat - Oat-2016-AxM - Oat-2016-AxM_21 GMI_ES05_c10205_390 locus 49.1 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg13 GMI_ES05_c10205_390 locus 60 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_ES05_c10205_390 locus 60 () Automated name-based View Maps
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-30 GMI_ES05_c10205_390 locus 9.65 (cM) Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_9 GMI_ES05_c10205_390 locus 51.7 () Automated name-based View Maps
GMI_ES02_c13827_987 locus 10.98 Oat - Oat-2016-Consensus - Oat-2016-Consensus-13 GMI_ES02_c13827_987 locus 68.7 () Automated name-based View Maps
Oat - Oat-2016-DxE - Oat-2016-DxE_13 GMI_ES02_c13827_987 locus 10.3 () Automated name-based View Maps
Oat - Oat-2016-PxB - Oat-2016-PxB_16 GMI_ES02_c13827_987 locus 0 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg13 GMI_ES02_c13827_987 locus 68.7 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_19 GMI_ES02_c13827_987 locus 30.3 () Automated name-based View Maps

GrainGenes is a product of the US Department of Agriculture.