*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2017-U01BxU006
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2017-U01BxU006-33
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2017-U01BxU006 [ View Map Set Info ]
Map Name: Oat-2017-U01BxU006-33
Map Start: 0 cM
Map Stop: 9.58 cM
Features by Type:
6 locus
6 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 6 of 6.
Oat - Oat-2017-U01BxU006 - Oat-2017-U01BxU006-33
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GMI_ES05_c2253_434 locus 0 Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-37 GMI_ES05_c2253_434 locus 1.93 (cM) Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_7 GMI_ES05_c2253_434 locus 43.57 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-9 GMI_ES05_c2253_434 locus 78.3 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg09 GMI_ES05_c2253_434 locus 78.3 () Automated name-based View Maps
GMI_ES01_c513_769 locus 0.31 Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-37 GMI_ES01_c513_769 locus 0.72 (cM) Automated name-based View Maps
Oat - Oat-2016-BxG - Oat-2016-BxG_5 GMI_ES01_c513_769 locus 49.1 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg09 GMI_ES01_c513_769 locus 78.3 () Automated name-based View Maps
Oat - Oat-2016-DxE - Oat-2016-DxE_8 GMI_ES01_c513_769 locus 28.6 () Automated name-based View Maps
Oat - Oat-2016-SxH - Oat-2016-SxH_27 GMI_ES01_c513_769 locus 33 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_13b GMI_ES01_c513_769 locus 11.8 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-9 GMI_ES01_c513_769 locus 78.3 () Automated name-based View Maps
GMI_ES15_c2918_866 locus 1.39 Oat - Oat-2016-Consensus - Oat-2016-Consensus-9 GMI_ES15_c2918_866 locus 78.3 () Automated name-based View Maps
Oat - Oat-2016-BxG - Oat-2016-BxG_5 GMI_ES15_c2918_866 locus 49.1 () Automated name-based View Maps
Oat - Oat-2017-UTauxU017 - Oat-2017-UTauxU017-37 GMI_ES15_c2918_866 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg09 GMI_ES15_c2918_866 locus 78.3 () Automated name-based View Maps
GMI_ES22_c2410_401 locus 7.31 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg09 GMI_ES22_c2410_401 locus 86.8 () Automated name-based View Maps
Oat - Oat-2016-IL4 - Oat-2016-IL4_13b GMI_ES22_c2410_401 locus 20.6 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_4 GMI_ES22_c2410_401 locus 100.1 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-9 GMI_ES22_c2410_401 locus 86.8 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_2 GMI_ES22_c2410_401 locus 10.6 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS8 GMI_ES22_c2410_401 locus 105.4 () Automated name-based View Maps
GMI_ES05_c9758_147 locus 7.91 Oat - Oat-2016-AxM - Oat-2016-AxM_20a GMI_ES05_c9758_147 locus 48.3 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-9 GMI_ES05_c9758_147 locus 86.8 () Automated name-based View Maps
Oat - Oat-2014-CrownRust - Oat-2014-AsbxMN_7 GMI_ES05_c9758_147 locus 49.51 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg09 GMI_ES05_c9758_147 locus 86.8 () Automated name-based View Maps
Oat - Oat-2016-IL5 - Oat-2016-IL5_SS8 GMI_ES05_c9758_147 locus 105.4 () Automated name-based View Maps
ES01_lrc29198_650 locus 9.58 No other positions

GrainGenes is a product of the US Department of Agriculture.