*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2016-KxO
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2016-KxO_37
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2016-KxO [ View Map Set Info ]
Map Name: Oat-2016-KxO_37
Map Start: 0
Map Stop: 8.4
Features by Type:
38 locus
38 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 38.       of 2 | Next
Oat - Oat-2016-KxO - Oat-2016-KxO_37
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
avgbs_201013 locus 8.4 Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_201013 locus 78 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_7 avgbs_201013 locus 16 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_201013 locus 78 () Automated name-based View Maps
avgbs_7157 locus 8.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_7157 locus 78 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_7157 locus 78 () Automated name-based View Maps
avgbs_1100 locus 8.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_1100 locus 78 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_1100 locus 78 () Automated name-based View Maps
avgbs_207832 locus 8.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_207832 locus 78 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_207832 locus 78 () Automated name-based View Maps
avgbs_206523 locus 8.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_206523 locus 78.8 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_206523 locus 78.8 () Automated name-based View Maps
avgbs_206256 locus 8.4 Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_206256 locus 77.6 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_206256 locus 77.6 () Automated name-based View Maps
avgbs_85335 locus 8.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_85335 locus 78 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_7 avgbs_85335 locus 16 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_85335 locus 78 () Automated name-based View Maps
avgbs_85336 locus 8.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_85336 locus 78 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_85336 locus 78 () Automated name-based View Maps
avgbs_205192 locus 8.4 Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_205192 locus 78 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_205192 locus 78 () Automated name-based View Maps
avgbs_110786 locus 8.4 Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_110786 locus 78 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_110786 locus 78 () Automated name-based View Maps
avgbs_120667 locus 8.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_120667 locus 78 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_120667 locus 78 () Automated name-based View Maps
avgbs_104726 locus 8.4 Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_104726 locus 77.6 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_7 avgbs_104726 locus 16.6 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_104726 locus 77.6 () Automated name-based View Maps
GMI_ES02_c17906_415 locus 8.4 Oat - Avena_2013_SNP - Avena_2013_SNP_3C GMI_ES02_c17906 locus 59.72 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 GMI_ES02_c17906_415 locus 79 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 GMI_ES02_c17906_415 locus 79 () Automated name-based View Maps
avgbs_7846 locus 6.4 Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_7846 locus 76.6 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_7846 locus 76.6 () Automated name-based View Maps
AME023a locus 6.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 AME023a locus 78 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 AME023a locus 78 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_42 AME023a locus 5 (cM) Automated name-based View Maps
GMI_ES03_c1166_266 locus 6.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 GMI_ES03_c1166_266 locus 78.8 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 GMI_ES03_c1166_266 locus 78.8 () Automated name-based View Maps
avgbs_7845 locus 6.4 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_7845 locus 76.6 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_7845 locus 76.6 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_7 avgbs_7845 locus 18.4 () Automated name-based View Maps
avgbs_112041 locus 2.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_112041 locus 85.3 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_112041 locus 85.3 () Automated name-based View Maps
avgbs_113630 locus 2.2 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_113630 locus 84.3 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_113630 locus 84.3 () Automated name-based View Maps
avgbs_201176 locus 2.2 Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_201176 locus 87.8 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_201176 locus 87.8 () Automated name-based View Maps
avgbs_113631 locus 2.2 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_113631 locus 84.3 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_113631 locus 84.3 () Automated name-based View Maps
avgbs_204930 locus 2.2 Oat - Oat-2016-HxZ - Oat-2016-HxZ_ss18 avgbs_204930 locus 9.4 () Automated name-based View Maps
Oat - Oat-2016-PxG - Oat-2016-PxG_7 avgbs_204930 locus 10.4 () Automated name-based View Maps
Oat - Oat-2016-OxT - Oat-2016-OxT_27 avgbs_204930 locus 24.7 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_204930 locus 87.8 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_204930 locus 87.8 () Automated name-based View Maps
avgbs_115302 locus 2.2 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_115302 locus 84.3 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_115302 locus 84.3 () Automated name-based View Maps
avgbs_115568 locus 2.2 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 avgbs_115568 locus 92.5 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 avgbs_115568 locus 92.5 () Automated name-based View Maps
ACO227 locus 2.2 Oat - Oat-2013-KxO-RGA - RGA-2013_KO42 aco227 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg17 ACO227 locus 84.3 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_42 ACO227 locus 3 (cM) Automated name-based View Maps
Oat - Oat-2006-KxO-RGA - Oat-2006-KxO-RGA_KO42 aco227 locus 0 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-42 aco227 locus 0 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-33 aco227di locus 23.7 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-17 ACO227 locus 84.3 () Automated name-based View Maps

GrainGenes is a product of the US Department of Agriculture.