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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2010-U8xPc68
(Reference Set)
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Correspondences
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Maps Oat-2010-U8xP_1
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2010-U8xPc68 [ View Map Set Info ]
Map Name: Oat-2010-U8xP_1
Map Start: 0 cM
Map Stop: 242.68 cM
Features by Type:
30 locus
30 Total

Map Features

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Items 1 to 25 of 30.       of 2 | Next
Oat - Oat-2010-U8xPc68 - Oat-2010-U8xP_1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AAAG481 locus 0 No other positions
GATC354 locus 27.46 No other positions
GAGA352 locus 46.29 No other positions
CGAC271 locus 62.98 No other positions
GAAG340 locus 74.15 No other positions
AAAG578 locus 83.87 No other positions
GAAG591 locus 92.65 No other positions
GAGA564 locus 99.39 No other positions
TCTA691 locus 105.11 No other positions
GCTA448 locus 113.49 No other positions
GACG293 locus 118.4 No other positions
GACG541 locus 124.63 No other positions
GACG274 locus 128.93 No other positions
GATC334 locus 131.32 No other positions
TCTA561 locus 133.71 No other positions
CGTA200 locus 137.21 No other positions
CGTA202 locus 139.5 No other positions
CGTA204 locus 141.3 No other positions
AAGC322 locus 143.1 No other positions
CGAC338 locus 144.79 No other positions
GACG312 locus 147.68 No other positions
TCTA557 locus 152.48 No other positions
GATC485 locus 156.59 No other positions
GAAG456 locus 162.21 No other positions
AAAG431 locus 167.12 No other positions

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