*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2004-TxM
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2004-TxM_19
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2004-TxM [ View Map Set Info ]
Map Name: Oat-2004-TxM_19
Map Start: 0
Map Stop: 55
Features by Type:
17 locus
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Oat - Oat-2004-TxM - Oat-2004-TxM_19
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
aca_cta169 locus 0 No other positions
wg719b locus 9 Oat - Oat-2016-Consensus - Oat-2016-Consensus-28 WG719B locus 62.7 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 WG719B locus 0 (cM) Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO3_38 wg719b locus 36 (cM) Automated name-based View Maps
Oat - Oat-2002-KxO - Oat-2002-KxO_3_38 wg719b locus 36 (cM) Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_3 WG719B locus 13.35 (cM) Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_1_3_38_X2 WG719B locus 9 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-3+38 wg719b locus 36.2 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg28 WG719B locus 62.7 () Automated name-based View Maps
agg_cac276 locus 9 No other positions
acg_cag243 locus 16 No other positions
cdo590bp locus 31 No other positions
isu2000x locus 34 Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-18 isu2000x locus 0 () Automated name-based View Maps
act_cac182 locus 34 No other positions
acg_cta81 locus 34 No other positions
bcd1261b locus 34 Oat - Oat-2009-KxO - Oat-2009-KxO_1_3_38_break BCD1261B locus 0 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 BCD1261B locus 137.4 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 BCD1261B locus 137.4 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 BCD1261B locus 137.5 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-3+38 bcd1261b locus 73.7 () Automated name-based View Maps
acg_caa70 locus 34 No other positions
acc_cta329 locus 34 No other positions
acg_cac78 locus 34 No other positions
acc_cac121 locus 34 No other positions
cdo1165bp locus 38 No other positions
act_ctc194 locus 38 No other positions
agg_caa209 locus 38 No other positions
aco142xp locus 55 No other positions

GrainGenes is a product of the US Department of Agriculture.