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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Oat-Oat-2004-CalxS42
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Maps Oat-2004-CalxS42_1
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Feature Types:
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Correspondence		 Always Display
locus
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Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
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BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2004-CalxS42 [ View Map Set Info ]
Map Name: Oat-2004-CalxS42_1
Map Start: 0 cM
Map Stop: 0.9 cM
Features by Type:
3 locus
3 Total

Map Features

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Items 1 to 3 of 3.
Oat - Oat-2004-CalxS42 - Oat-2004-CalxS42_1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Pc94 locus 0 Oat - Oat-2004-MS68xS42 - Oat-2004-MS68xS42_1 Pc94 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2007-CalxS42 - Oat-2007-CalxS42_1 Pc94 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2007-AsbxS42 - Oat-2007-AsbxS42_1 Pc94 locus 0 (cM) Automated name-based View Maps
SCAR94-1 locus 0.9 Oat - Oat-2004-MS68xS42 - Oat-2004-MS68xS42_1 SCAR94-1 locus 3.4 (cM) Automated name-based View Maps
SCAR94-2 locus 0.9 Oat - Oat-2004-MS68xS42 - Oat-2004-MS68xS42_1 SCAR94-2 locus 3.4 (cM) Automated name-based View Maps
Oat - Oat-2009-SxW-RGA - Oat-2009-SxW-RGA_AswAC SCAR94-2 locus 73.1 (cM) Automated name-based View Maps
Oat - Oat-2009-MxN-RGA - Oat-2009-MxN-RGA_MN3 SCAR94-2 locus 51.7 (cM) Automated name-based View Maps

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