*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2001-KxO
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2001-KxO_2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2001-KxO [ View Map Set Info ]
Map Name: Oat-2001-KxO_2
Map Start: 0 cM
Map Stop: 52.5 cM
Features by Type:
54 locus
54 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 54.       of 3 | Next
Oat - Oat-2001-KxO - Oat-2001-KxO_2
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
aco193c locus 0 No other positions
CDO1466 locus 5 Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 CDO1466 locus 22.43 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 CDO1466 locus 147.3 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO2 cdo1466 locus 1.88 (cM) Automated name-based View Maps
Oat - Oat-1997-64Lines - Oat-1997-64Lines_2 cdo1466 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 CDO1466 locus 139.4 () Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-D Xcdo1466 locus 30.2 () Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_19 cdo1466 locus 41 (cM) Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO2 cdo1466 locus 5 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 CDO1466 locus 139.4 () Automated name-based View Maps
Oat - Oat, OxT - Oat-OxT-9 cdo1466 locus 12.3 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 cdo1466 locus 5.28 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 CDO1466 locus 17 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 CDO1466 locus 147.3 () Automated name-based View Maps
Xcdo1466 locus 5 Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 Xcdo1466 locus 22.43 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-2 Xcdo1466 locus 0 () Automated name-based View Maps
Oat - Oat-1997-64Lines - Oat-1997-64Lines_2 Xcdo1466 locus 0 (cM) Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-D Xcdo1466 locus 30.2 () Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_19 Xcdo1466 locus 41 (cM) Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 Xcdo1466 locus 36 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO2 Xcdo1466 locus 1.88 (cM) Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-2 Xcdo1466 locus 0 () Automated name-based View Maps
BCD149 locus 5 Oat - Oat, OxT - Oat-OxT-9 bcd149 locus 13.9 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 BCD149 locus 142 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 BCD149 locus 142 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 BCD149 locus 19 (cM) Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-D Xbcd149 locus 31.3 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 bcd149 locus 4.06 () Automated name-based View Maps
Xbcd149 locus 5 Oat - Oat, KxO - Oat-KxO-2 Xbcd149 locus 1.6 () Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-D Xbcd149 locus 31.3 () Automated name-based View Maps
BCD1095A locus 10 Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 BCD1095A locus 139.8 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 BCD1095A locus 139.8 () Automated name-based View Maps
Sugarcane - Saccharum, Cornell - Saccharum-25 BCD1095a locus 0 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 BCD1095a locus 9.13 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 BCD1095A locus 22 (cM) Automated name-based View Maps
Xbcd1095A locus 10 Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_2 Xbcd1095A locus 6.1 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2B Xbcd1095A locus 103 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-2 Xbcd1095A locus 6.1 () Automated name-based View Maps
ACO134A locus 10 No other positions
BCD342A locus 10 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 BCD342A locus 139.8 () Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 BCD342A locus 28.04 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 bcd342a locus 8.56 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 BCD342A locus 19 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 BCD342A locus 139.8 () Automated name-based View Maps
Xbcd342A locus 10 Oat - Oat, KxO - Oat-KxO-2 Xbcd342A locus 4.3 () Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-2 Xbcd342A locus 4.3 () Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 Xbcd342A locus 28 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6B Xbcd342A locus 72 () Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 Xbcd342A locus 28.04 (cM) Automated name-based View Maps
UMN5765_2B locus 10 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 UMN5765_2B locus 139.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 UMN5765_2B locus 139.2 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 UMN5765_2B locus 19 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 umn5765_2b locus 7.54 () Automated name-based View Maps
Xumn5765_2B locus 10 No other positions
BCD1851C locus 10 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 BCD1851C locus 130.4 () Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 BCD1851C locus 39.52 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 BCD1851C locus 130.4 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 bcd1851c locus 12.2 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 BCD1851C locus 25 (cM) Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO2 bcd1851c locus 9.18 (cM) Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO2 bcd1851c locus 12 (cM) Automated name-based View Maps
XBCD1851C locus 10 Oat - Oat, KxO - Oat-KxO-2 Xbcd1851C locus 10.1 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO2 Xbcd1851C locus 9.18 (cM) Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-2 Xbcd1851C locus 10.1 () Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 Xbcd1851C locus 39.52 (cM) Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 Xbcd1851C locus 48 () Automated name-based View Maps
acacac390 locus 10 No other positions
Wacacac390 locus 10 Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 Wacacac390 locus 14.8 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 Wacacac390 locus 32 (cM) Automated name-based View Maps
acccac121 locus 10 No other positions
Wacccac121 locus 10 Oat - Oat-2009-KxO - Oat-2009-KxO_2 Wacccac121 locus 30 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 Wacccac121 locus 15.3 () Automated name-based View Maps
CDO1158 locus 16.25 Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_6 cdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_13 cdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 CDO1158 locus 30 (cM) Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-B Xcdo1158 locus 76.3 () Automated name-based View Maps
Oat - Oat-2003-OxM-QTL1 - Oat-2003-OxM-QTL1_20 cdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_27 cdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 CDO1158 locus 129.6 () Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO2 cdo1158 locus 16 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 CDO1158 locus 16.2 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO2 cdo1158 locus 12.71 (cM) Automated name-based View Maps
Oat - Oat-2004-OxM-QTL4 - Oat-2004-OxM-QTL4_6 cdo1158 locus 15.5 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_6 cdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 CDO1158 locus 129.6 () Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_20 cdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2003-OxM-QTL1 - Oat-2003-OxM-QTL1_6 cdo1158 locus 15.5 (cM) Automated name-based View Maps
Xcdo1158 locus 16.25 Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO2 Xcdo1158 locus 12.71 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_6 Xcdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2003-OxM-QTL1 - Oat-2003-OxM-QTL1_20 Xcdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2003-OxM-QTL1 - Oat-2003-OxM-QTL1_6 Xcdo1158 locus 15.5 (cM) Automated name-based View Maps
Oat - Oat-2004-OxM-QTL4 - Oat-2004-OxM-QTL4_6 Xcdo1158 locus 15.5 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_20 Xcdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-2 Xcdo1158 locus 15.6 () Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-B Xcdo1158 locus 76.3 () Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_13 Xcdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_27 Xcdo1158 locus 20 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_6 Xcdo1158 locus 20 (cM) Automated name-based View Maps
BCD1819B locus 16.25 Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_2 BCD1819B locus 20.1 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 bcd1819b locus 15.4 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 BCD1819B locus 121.2 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 BCD1819B locus 30 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 BCD1819B locus 121.2 () Automated name-based View Maps
Xbcd1819B locus 16.25 Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_2 Xbcd1819B locus 20.1 (cM) Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-C Xbcd1819B locus 47.1 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-2 Xbcd1819B locus 20.1 () Automated name-based View Maps
BCD1882C locus 16.25 Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 BCD1882C locus 52.33 (cM) Automated name-based View Maps
Oat - Oat-2004-TxM - Oat-2004-TxM_21 bcd1882c locus 30 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 BCD1882C locus 129.6 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 bcd1882c locus 16.2 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 BCD1882C locus 32 (cM) Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 BCD1882C locus 129.6 () Automated name-based View Maps
Xbcd1882C locus 16.25 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 Xbcd1882C locus 58 () Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 Xbcd1882C locus 52.33 (cM) Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-2 Xbcd1882C locus 15.6 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-2 Xbcd1882C locus 15.6 () Automated name-based View Maps
UMN388 locus 16.25 Oat - Oat, KxO, 2003 - Oat-KxO/2003-2 umn388 locus 14.6 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg08 UMN388 locus 130.8 () Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 UMN388 locus 45.92 (cM) Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_2 UMN388 locus 32 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-2 Xumn388 locus 12.9 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-8 UMN388 locus 130.8 () Automated name-based View Maps

GrainGenes is a product of the US Department of Agriculture.