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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2001-KxM
(Reference Set)
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Correspondences
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Maps Oat-2001-KxM_6
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2001-KxM [ View Map Set Info ]
Map Name: Oat-2001-KxM_6
Map Start: 0
Map Stop: 24
Features by Type:
8 locus
8 Total

Map Features

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Items 1 to 8 of 8.
Oat - Oat-2001-KxM - Oat-2001-KxM_6
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
cdo1419a locus 0 No other positions
cdo1357c locus 4 Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_6 CDO1357C locus 20 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_6 CDO1357C locus 20 (cM) Automated name-based View Maps
cdo82a locus 6 No other positions
cdo545y locus 9 No other positions
cdo669d locus 10 Barley - Barley, KxM - Hordeum-KxM-5H CDO669D locus 170.8 () Automated name-based View Maps
acacaa205 locus 10 Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_6 acacaa205 locus 12.5 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_6 acacaa205 locus 12.5 (cM) Automated name-based View Maps
aaccaa290 locus 10 No other positions
acgcaa196 locus 24 Oat - Oat-2001-KxO - Oat-2001-KxO_6 acgcaa196 locus 12.5 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_6 acgcaa196 locus 12.5 (cM) Automated name-based View Maps

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