*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-2001-KxM
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-2001-KxM_37
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-2001-KxM [ View Map Set Info ]
Map Name: Oat-2001-KxM_37
Map Start: 0
Map Stop: 31
Features by Type:
7 locus
7 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 7 of 7.
Oat - Oat-2001-KxM - Oat-2001-KxM_37
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
acc2 locus 0 No other positions
cdo665d locus 10 Barley - Barley consensus 2003 - Barley-consensus-2003-7H CDO665d locus 76.4 () Automated name-based View Maps
umn51b locus 14 Oat - Oat-2009-KxO - Oat-2009-KxO_37 UMN51B locus 13 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-37 umn51b locus 3.75 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-11 UMN51B locus 61.2 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_37 UMN51B locus 6.25 (cM) Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_20 UMN51B locus 33.9 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 UMN51B locus 61.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 UMN51B locus 61.2 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg01 UMN51B locus 61.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-1 UMN51B locus 61.2 () Automated name-based View Maps
Oat - Oat, OxT - Oat-OxT-4 umn51b locus 77.7 () Automated name-based View Maps
Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_UL.7 umn51b locus 0 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-12 UMN51B locus 61.2 () Automated name-based View Maps
bcd1729b locus 16 No other positions
cdo1358b locus 16 Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_21 cdo1358b locus 3 (cM) Automated name-based View Maps
Oat - Oat-2004-OxM-QTL4 - Oat-2004-OxM-QTL4_21 cdo1358b locus 2.2 (cM) Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-13 cdo1358b locus 35.7 () Automated name-based View Maps
aaccaa135 locus 20 No other positions
acccac263 locus 31 No other positions

GrainGenes is a product of the US Department of Agriculture.