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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat-1997-64Lines
(Reference Set)
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Maps Oat-1997-64Lines_29
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat-1997-64Lines [ View Map Set Info ]
Map Name: Oat-1997-64Lines_29
Map Start: 0 cM
Map Stop: 5 cM
Features by Type:
3 locus
3 qtl
6 Total

Map Features

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Items 1 to 6 of 6.
Oat - Oat-1997-64Lines - Oat-1997-64Lines_29
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Xcdo58A locus 0 Oat - Oat, KxO/QTL - Oat-KxO/Q-29 Xcdo58A locus 10.3 () Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-29 Xcdo58A locus 26 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-29 Xcdo58A locus 10.3 () Automated name-based View Maps
QTILL.64Lines_29 qtl 0 No other positions
QHKW.64Lines_29 qtl 0 No other positions
QGY.64Lines_29 qtl 0 No other positions
64Lines_29_FlankingMarker locus 5 No other positions
cdo58a locus 0 Oat - Oat, KxO, 2003 - Oat-KxO/2003-29_43 cdo58a locus 14.6 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_29_43 CDO58A locus 13 (cM) Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO29_43 cdo58a locus 15 (cM) Automated name-based View Maps

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