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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB, OPA2008
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OWB-OPA2008-1H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, OPA2008 [ View Map Set Info ]
Map Name: Hordeum-OWB-OPA2008-1H
Map Start: 0
Map Stop: 156.3
Features by Type:
252 locus
25 qtl
277 Total

Map Features

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Items 1 to 25 of 277.       of 12 | Next
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-1H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
QMe.StMo-1H.5 qtl 153.01 No other positions
QAa.StMo-1H qtl 153.01 No other positions
QFge.HaTR-1H.2 qtl 142.05 No other positions
QBgnm.StMo-1H.2 qtl 140.96 No other positions
QBgsk.StMo-1H.2 qtl 112.05 No other positions
QFge.HaTR-1H.1 qtl 112.05 No other positions
QMe.StMo-1H.4 qtl 112.05 No other positions
QBgsg.StMo-1H.3 qtl 112.05 No other positions
QBgnm.StMo-1H.1 qtl 112.05 No other positions
QMe.HaMo-1H.2 qtl 112.05 No other positions
QTw.HaMo-1H qtl 112.05 No other positions
QS/T.HaMo-1H qtl 77.5 No other positions
QKp.HaMo-1H.2 qtl 77.5 No other positions
QBgsk.StMo-1H.1 qtl 77.5 No other positions
QBgsg.StMo-1H qtl 77.5 No other positions
QBgn.StMo-1H qtl 77.5 No other positions
QMe.StMo-1H.3 qtl 57.71 No other positions
QMe.HaMo-1H.1 qtl 35.43 No other positions
QKp.HaMo-1H.1 qtl 35.43 No other positions
QMe.StMo-1H.2 qtl 22.19 No other positions
QGpc.DiMo-1H qtl 22.19 No other positions
QMe.StMo-1H.1 qtl 12.23 No other positions
QGN.BlE2-1H qtl 12.23 No other positions
QDp.StMo-1H qtl 12.23 No other positions
QAa.HaTR-1H.1 qtl 12.23 No other positions

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