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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat deletion-line bins
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps CS-deletions-6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
breakpointinterval
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat deletion-line bins [ View Map Set Info ]
Map Name: CS-deletions-6D
Map Start: -1
Map Stop: 1
Features by Type:
10 breakpointinterval
10 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Wheat ABD - Wheat deletion-line bins - CS-deletions-6D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
6DS6-0.99-1.00 breakpointinterval -1 - -0.99 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D 6DS6-0.99-1.00 breakpointinterval -1 - -0.99 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D 6DS6-0.99-1.00 breakpointinterval -1 - -0.99 () Automated name-based View Maps
6DS4-0.79-0.99 breakpointinterval -0.99 - -0.79 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D 6DS4-0.79-0.99 breakpointinterval -0.99 - -0.79 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D 6DS4-0.79-0.99 breakpointinterval -0.99 - -0.79 () Automated name-based View Maps
6DS2-0.45-0.79 breakpointinterval -0.79 - -0.45 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D 6DS2-0.45-0.79 breakpointinterval -0.79 - -0.45 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D 6DS2-0.45-0.79 breakpointinterval -0.79 - -0.45 () Automated name-based View Maps
C-6DS2-0.45 breakpointinterval -0.45 - 0 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D C-6DS2-0.45 breakpointinterval -0.45 - 0 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D C-6DS2-0.45 breakpointinterval -0.45 - 0 () Automated name-based View Maps
C-6DL6-0.29 breakpointinterval 0 - 0.29 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D C-6DL6-0.29 breakpointinterval 0 - 0.29 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D C-6DL6-0.29 breakpointinterval 0 - 0.29 () Automated name-based View Maps
6DL6-0.29-0.47 breakpointinterval 0.29 - 0.47 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D 6DL6-0.29-0.47 breakpointinterval 0.29 - 0.47 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D 6DL6-0.29-0.47 breakpointinterval 0.29 - 0.47 () Automated name-based View Maps
6DL1-0.47-0.68 breakpointinterval 0.47 - 0.68 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D 6DL1-0.47-0.68 breakpointinterval 0.47 - 0.68 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D 6DL1-0.47-0.68 breakpointinterval 0.47 - 0.68 () Automated name-based View Maps
6DL12-0.68-0.74 breakpointinterval 0.68 - 0.74 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D 6DL12-0.68-0.74 breakpointinterval 0.68 - 0.74 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D 6DL12-0.68-0.74 breakpointinterval 0.68 - 0.74 () Automated name-based View Maps
6DL11-0.74-0.80 breakpointinterval 0.74 - 0.8 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D 6DL11-0.74-0.80 breakpointinterval 0.74 - 0.8 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D 6DL11-0.74-0.80 breakpointinterval 0.74 - 0.8 () Automated name-based View Maps
6DL10-0.80-1.00 breakpointinterval 0.8 - 1 Wheat ABD - Wheat, Physical, EST - Chinese_Spring_Deletion_6D 6DL10-0.80-1.00 breakpointinterval 0.8 - 1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6D 6DL10-0.80-1.00 breakpointinterval 0.8 - 1 () Automated name-based View Maps

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