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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, CIMMYT Integrated
(Reference Set)
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Correspondences
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Maps CIMMYT-integrated-5A
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, CIMMYT Integrated [ View Map Set Info ]
Map Name: CIMMYT-integrated-5A
Map Start: 25.87
Map Stop: 168.86
Features by Type:
11 locus
11 Total

Map Features

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Items 1 to 11 of 11.
Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-5A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wPt1165 locus 25.87 No other positions
wPt2768 locus 34.51 No other positions
wPt4131 locus 34.67 No other positions
wPt9887 locus 36.65 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-5A XwPt9887-5A locus 0 () Automated name-based View Maps
wPt0605 locus 58.2 No other positions
wPt3924 locus 62.56 No other positions
wPt3620 locus 70.47 No other positions
wPt8226 locus 79.85 No other positions
wPt9834 locus 133.53 No other positions
wPt7255 locus 134.57 No other positions
wPt5231 locus 168.86 No other positions

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