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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat S^l^-Ae. longissima, YxY
(Reference Set)
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Correspondences
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Maps Aelongissima-Zhang-2
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat S^l^ - Ae. longissima, YxY [ View Map Set Info ]
Map Name: Aelongissima-Zhang-2
Map Start: 0
Map Stop: 47.8
Features by Type:
8 locus
8 Total

Map Features

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Items 1 to 8 of 8.
Wheat S^l^ - Ae. longissima, YxY - Aelongissima-Zhang-2
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xpsr375-2S locus 0 Wheat ABD - 3B Physical - Physical-3B psr375 locus 6.78 () Automated name-based View Maps
Xpsr109(Rbcs)-2S locus 10 No other positions
Xpsr900-2S locus 15 No other positions
Xpsr130-2S locus 18 No other positions
Centromere-2S locus 18.4 No other positions
Xpsr571-2S locus 18.8 No other positions
Xpsr934-2S locus 35.8 Barley - Barley, GxH - Hordeum-GxH-6H PSR934 locus 88.14 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H PSR934 locus 144.8 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-2H PSR934 locus 200.57 () Automated name-based View Maps
Xpsr609-2S locus 47.8 Barley - Barley, GxH - Hordeum-GxH-2H PSR609 locus 252.54 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H PSR609 locus 154.8 () Automated name-based View Maps

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