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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Kyoto
(Reference Set)
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Maps Ta-Kyoto-3A
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Kyoto [ View Map Set Info ]
Map Name: Ta-Kyoto-3A
Map Start: 0
Map Stop: 55
Features by Type:
8 locus
8 Total

Map Features

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Items 1 to 8 of 8.
Wheat ABD - Wheat, Kyoto - Ta-Kyoto-3A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xglk595-3A locus 55 No other positions
Xglk118-3A locus 37 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xglk118-3A locus 92 () Automated name-based View Maps
Xglk221-3A locus 11 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xglk221-3A locus 66 () Automated name-based View Maps
Xglk485-3A locus 13 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-3A Xglk485-3A locus 82.9 () Automated name-based View Maps
Xglk577-3A locus 30 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xglk577-3A locus 95 () Automated name-based View Maps
Xglk645-3A locus 0 Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-3A Xglk645-3A locus 81 () Automated name-based View Maps
Xglk718-3A locus 43 No other positions
Xglk747-3A locus 20 No other positions

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