*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO, AFLP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Oat-KxO/AFLP-7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO, AFLP [ View Map Set Info ]
Map Name: Oat-KxO/AFLP-7
Map Start: 0
Map Stop: 66
Features by Type:
18 locus
18 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 18 of 18.
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-7
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
e6m5-7 locus 12 Oat - Oat, CxI - Oat-CxI-6 e6m5-7 locus 10.5 () Automated name-based View Maps
e3m7-6 locus 24 Oat - Oat, CxI - Oat-CxI-10 e3m7-6 locus 40.5 () Automated name-based View Maps
e1m3-9 locus 16 Oat - Oat, CxI - Oat-CxI-10 e1m3-9 locus 45 () Automated name-based View Maps
e8m1-8 locus 20 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 e8m1-8 locus 0 () Automated name-based View Maps
Oat - Oat, CxI - Oat-CxI-11 e8m1-8 locus 0 () Automated name-based View Maps
e1m3-1 locus 20 Oat - Oat, CxI - Oat-CxI-24 e1m3-1 locus 9 () Automated name-based View Maps
Xisu2192A locus 0 Oat - Oat, KxO/QTL - Oat-KxO/Q-7 Xisu2192A locus 28.8 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO7_10_28 Xisu2192A locus 88.82 (cM) Automated name-based View Maps
Oat - Oat-2006-KxO-RGA - Oat-2006-KxO-RGA_KO7_10_28 Xisu2192A locus 36.5 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_7-10-28 Xisu2192A locus 65 (cM) Automated name-based View Maps
Xbcd1280A locus 4 Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_9 Xbcd1280A locus 5 (cM) Automated name-based View Maps
Oat - Oat-2006-KxO-RGA - Oat-2006-KxO-RGA_KO7_10_28 Xbcd1280A locus 23.75 (cM) Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO7_10_28 Xbcd1280A locus 76.94 (cM) Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-7 Xbcd1280A locus 24.8 () Automated name-based View Maps
Oat - Oat-2003-OxM-QTL1 - Oat-2003-OxM-QTL1_29 Xbcd1280A locus 2.7 (cM) Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-7 Xbcd1280A locus 24.8 () Automated name-based View Maps
Oat - Oat-2003-OxM-QTL2 - Oat-2003-OxM-QTL2_29 Xbcd1280A locus 2.7 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_7-10-28 Xbcd1280A locus 65 (cM) Automated name-based View Maps
e6m5-7b locus 4 No other positions
Xbcd1049 locus 12 Oat - Oat, KxO - Oat-KxO-7 Xbcd1049 locus 19.2 () Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-7 Xbcd1049 locus 19.2 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_7-10-28 Xbcd1049 locus 65 (cM) Automated name-based View Maps
e8m3-1d locus 24 No other positions
e5m5-14 locus 28 No other positions
e4m2-8 locus 28 No other positions
e2m2-14 locus 34 No other positions
Xcdo673A locus 34 Oat - Oat-2006-KxO-RGA - Oat-2006-KxO-RGA_KO7_10_28 Xcdo673A locus 0 (cM) Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-7 Xcdo673A locus 8.4 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-7 Xcdo673A locus 8.4 () Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO7_10_28 Xcdo673A locus 62.82 (cM) Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_7-10-28 Xcdo673A locus 51.25 (cM) Automated name-based View Maps
Xcdo1445B locus 34 Oat - Oat, KxO - Oat-KxO-7 Xcdo1445B locus 0 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_7-10-28 Xcdo1445B locus 51.25 (cM) Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-7 Xcdo1445B locus 0 () Automated name-based View Maps
Xcdo304 locus 48 Oat - Oat, KxO/QTL - Oat-KxO/Q-7 Xcdo304 locus 4.1 () Automated name-based View Maps
Oat - Oat, KxO - Oat-KxO-7 Xcdo304 locus 4.1 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_7-10-28 Xcdo304 locus 51.25 (cM) Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO7_10_28 Xcdo304 locus 60.47 (cM) Automated name-based View Maps
e5m5-10b locus 60 No other positions
e8m3-1b locus 66 No other positions

GrainGenes is a product of the US Department of Agriculture.