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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, KxO
(Reference Set)
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Correspondences
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Maps Oat-KxO-21
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, KxO [ View Map Set Info ]
Map Name: Oat-KxO-21
Map Start: 0
Map Stop: 3.5
Features by Type:
4 locus
4 Total

Map Features

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Items 1 to 4 of 4.
Oat - Oat, KxO - Oat-KxO-21
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbcd1250 locus 0 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-21 Xbcd1250 locus 20 () Automated name-based View Maps
Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_21 Xbcd1250 locus 3.5 (cM) Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-F Xbcd1250 locus 55.3 () Automated name-based View Maps
Oat - Oat, KxO/QTL - Oat-KxO/Q-21 Xbcd1250 locus 3.5 () Automated name-based View Maps
Xumn441B locus 1.5 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-21 Xumn441B locus 26 () Automated name-based View Maps
Xcdo1407A locus 3.5 Oat - Oat, KxO/QTL - Oat-KxO/Q-21 Xcdo1407A locus 0 () Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-21 Xcdo1407A locus 26 () Automated name-based View Maps
Xbcd782 locus 2.5 Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-D Xbcd782 locus 34.6 () Automated name-based View Maps
Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_21 Xbcd782 locus 2.5 (cM) Automated name-based View Maps

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