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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, CxI
(Reference Set)
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Maps Oat-CxI-13
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, CxI [ View Map Set Info ]
Map Name: Oat-CxI-13
Map Start: 0
Map Stop: 39.5
Features by Type:
15 locus
15 Total

Map Features

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Items 1 to 15 of 15.
Oat - Oat, CxI - Oat-CxI-13
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
e8m3-10 locus 0 Oat - Oat-2002-CxI_Pal - Oat-2002-CxI-Pal_13 e8m3-10 locus 0 (cM) Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e8m3-10 locus 0 () Automated name-based View Maps
e6m5-1a locus 0 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e6m5-1a locus 16 () Automated name-based View Maps
e6m4-3 locus 6 Oat - Oat-2002-CxI_Pal - Oat-2002-CxI-Pal_13 e6m4-3 locus 5.87 (cM) Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 e6m4-3 locus 11.75 (cM) Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e6m4-3 locus 28 () Automated name-based View Maps
e2m3-2n locus 9 No other positions
e9m6-1n locus 12 Oat - Oat-2002-CxI_Pal - Oat-2002-CxI-Pal_13 e9m6-1n locus 10.95 (cM) Automated name-based View Maps
e6m6-20n locus 15 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e6m6-20n locus 54 () Automated name-based View Maps
e6m5-10n locus 18 Oat - Oat-2002-CxI_Pal - Oat-2002-CxI-Pal_13 e6m5-10n locus 14.69 (cM) Automated name-based View Maps
e8m8-2n locus 18 Oat - Oat-2002-CxI_Pal - Oat-2002-CxI-Pal_13 e8m8-2n locus 20.83 (cM) Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e8m8-2n locus 0 () Automated name-based View Maps
e9m5-5n locus 19.5 No other positions
e9m5-9n locus 21.5 No other positions
e4m2-1fn locus 30.5 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e4m2-1fn locus 56 () Automated name-based View Maps
Oat - Oat-2002-CxI_Pal - Oat-2002-CxI-Pal_13 e4m2-1fn locus 20.83 (cM) Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 e4m2-1fn locus 44.32 (cM) Automated name-based View Maps
e1m6-5n locus 30.5 Oat - Oat-2002-CxI_Pal - Oat-2002-CxI-Pal_13 e1m6-5n locus 30.17 (cM) Automated name-based View Maps
Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_2 e1m6-5n locus 48.86 (cM) Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e1m6-5n locus 54 () Automated name-based View Maps
e8m3-13 locus 30.5 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e8m3-13 locus 0 () Automated name-based View Maps
e8m1-9n locus 30.5 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e8m1-9n locus 60 () Automated name-based View Maps
e3m7-3n locus 39.5 Oat - Oat-2002-CxI_Pal - Oat-2002-CxI-Pal_13 e3m7-3n locus 34.18 (cM) Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e3m7-3n locus 60 () Automated name-based View Maps

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