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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Oat, CxI
(Reference Set)
Min.
Correspondences
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Maps Oat-CxI-10
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Oat - Oat, CxI [ View Map Set Info ]
Map Name: Oat-CxI-10
Map Start: 0
Map Stop: 94.5
Features by Type:
28 locus
28 Total

Map Features

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Items 1 to 25 of 28.       of 2 | Next
Oat - Oat, CxI - Oat-CxI-10
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
e1m6-6 locus 0 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e1m6-6 locus 90 () Automated name-based View Maps
e2m2-1e locus 0 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-15 e2m2-1e locus 0 () Automated name-based View Maps
e4m2-1c locus 0 No other positions
e6m6-4a locus 0 No other positions
e7m2-7 locus 15 No other positions
e6m6-11 locus 27 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-22 e6m6-11 locus 32 () Automated name-based View Maps
e4m7-3 locus 34.5 No other positions
e1m3-4a locus 34.5 No other positions
e3m7-6 locus 40.5 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-7 e3m7-6 locus 24 () Automated name-based View Maps
e3m7-2 locus 42 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e3m7-2 locus 94 () Automated name-based View Maps
e2m3-12 locus 45 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e2m3-12 locus 74 () Automated name-based View Maps
e2m2-5 locus 45 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e2m2-5 locus 90 () Automated name-based View Maps
e1m3-9 locus 45 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-7 e1m3-9 locus 16 () Automated name-based View Maps
e8m3-3 locus 45 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-17 e8m3-3 locus 41 () Automated name-based View Maps
e4m8-4 locus 48 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e4m8-4 locus 100 () Automated name-based View Maps
e6m5-2 locus 49.5 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e6m5-2 locus 128 () Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e6m5-2 locus 0 () Automated name-based View Maps
e6m6-6n locus 51 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e6m6-6n locus 74 () Automated name-based View Maps
e2m2-5a locus 52.5 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e2m2-5a locus 66 () Automated name-based View Maps
e6m5-5 locus 55.5 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e6m5-5 locus 92 () Automated name-based View Maps
Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-2 e6m5-5 locus 0 () Automated name-based View Maps
e8m3-7 locus 57 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5 e8m3-7 locus 32 () Automated name-based View Maps
e8m3-2 locus 58.5 No other positions
e4m2-1e locus 58.5 No other positions
e4m7-2 locus 64.5 No other positions
e1m8-6 locus 76.5 No other positions
e4m6-6a locus 76.5 Oat - Oat, KxO, AFLP - Oat-KxO/AFLP-5-30 e4m6-6a locus 92 () Automated name-based View Maps

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