*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Maize, TxCM
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Zea-Ahn-4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Maize, TxCM [ View Map Set Info ]
Map Name: Zea-Ahn-4
Map Start: 0
Map Stop: 224.55
Features by Type:
23 locus
23 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 23 of 23.
Maize - Maize, TxCM - Zea-Ahn-4
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
AASR115 locus 0 No other positions
CDO344b locus 5.8 Oat - Oat, OxT - Oat-OxT-16 CDO344b locus 101.2 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-6 CDO344B locus 86.5 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg06 CDO344B locus 86.5 () Automated name-based View Maps
AASC94 locus 16.75 No other positions
RZ329b locus 25.4 No other positions
PIO2725 locus 36.4 No other positions
UMC31A locus 69.9 No other positions
BNL7.20L locus 88.2 No other positions
nia2 locus 89.25 No other positions
CDO475c locus 90.3 No other positions
RZ467b locus 91.35 No other positions
RZ630c locus 93.55 No other positions
CDO400b locus 95.75 Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-5H CDO400b locus 115 (cM) Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-5H CDO400b locus 84.2 () Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-5H CDO400b locus 115 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-5H CDO400b locus 115 (cM) Automated name-based View Maps
CDO507a locus 101.65 Rice - Rice, BxOl - Rice-CU-2 CDO507a locus 59.1 () Automated name-based View Maps
RZ567b locus 106.25 No other positions
mpik3 locus 108.5 No other positions
mgs2 locus 147.4 No other positions
CDO534a locus 156.05 Rice - Rice, BxOl - Rice-CU-2 CDO534a locus 141.8 () Automated name-based View Maps
c2 locus 167.05 No other positions
CDO365 locus 171 Rice - Rice, BxOl - Rice-CU-11 CDO365 locus 26.1 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_3-38 CDO365 locus 0 (cM) Automated name-based View Maps
Diploid oat - Diploid Oat, Cornell2 - Avena-Sorrells-B Xcdo365 locus 59.9 () Automated name-based View Maps
Oat - Oat-2001-KxO-QTL - Oat-2001-KxO-QTL_3-38 CDO365 locus 0 (cM) Automated name-based View Maps
Oat - Oat-2003-OxM-QTL1 - Oat-2003-OxM-QTL1_20 cdo365 locus 14.6 (cM) Automated name-based View Maps
Oat - Oat-2004-OxM-QTL4 - Oat-2004-OxM-QTL4_20 cdo365 locus 14.6 (cM) Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_20 cdo365 locus 17 (cM) Automated name-based View Maps
CDO127a locus 172.05 Rice - Rice, BxOl - Rice-CU-12 CDO127a locus 96.5 () Automated name-based View Maps
BNL10.05 locus 177.25 No other positions
UMC19 locus 190.6 No other positions
BNL8.23 locus 224.55 No other positions

GrainGenes is a product of the US Department of Agriculture.