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GrainGenes Trait Study Report: Reaction to leaf rust, Colosseo x Lloyd, Maccaferri 2008a

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Trait Study	Reaction to leaf rust, Colosseo x Lloyd, Maccaferri 2008a
Trait	Reaction to leaf rust
Reference	Maccaferri M et al. (2008) A major QTL for durable leaf rust resistance widely exploited in durum wheat breeding programs maps on the distal region of chromosome arm 7BL. Theoretical and Applied Genetics 117:1225-1240.
Ontology	TO:0000439 Planteome fungal disease resistance
Parental Description	Colosseo An Italian cultivar with high yield potential, but poorly adapted to Southern Mediterranean environments under high terminal drought and heat Lloyd A US cultivar well-adapted to the relatively low-input conditions typical of the US Northern Plains
Population Size	176
Population Type	Recombinant inbred lines (RILs)
QTL Analysis Method	Composite Interval Mapping (CIM) using Windows QTL-Cartographer version 2.5
Markers Tested	554
QTLs Found	6
Comment	QTL names created by GrainGenes curators to align with common QTL nomenclature with synonyms to the QTL id codes in the Svevo genome assembly Curator Note (VCB, 04/2019). QTL names and markers associated with QTL in this traitstudy are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate these QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
QTL	QLr.CoxLd-2A.1 [ Show all 6 ]

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