Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA040988

[Submit comment/correction]

Sequence	AA040988
External Databases	Data at GenBank Data at EMBL Data at DDBJ
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA040988
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA Homology	WHE10A02.s1
DNA	ATGCCCGTCCCTCCACCGTCCACCGCCGGCCGCCCCTCCACCGTCCACCG CCGGCCGCCCCTCCAACGTTGGCCTCCTCTACTGCGGACGGACGGAAGGG GAGGGGCCTCCACCGCATCCGCCTCCACCGACGGCTGGAAGGAGATCTCG CCGGTAAGGCAATCTTAATCTCCCTTTGTGCTTGTACTTGATTAGGAGGT TGACGAACACTAGACACCCCTAGTTCAGTGAAGAAGAAGCAACAGACATC CCTAGTTCAGTTAGTTTGGGTGCTTACAACTTGTGAAGATAGTGAGAGAG ATGTACATCCTTTTCCCTGCGAAACGAGAGAGAGGACCTGTCCATTCAGA TCTTTACCATGATGTTGTTTCAAGCGGGATTGTACCGAGATCACTTCGCC TGCGGCTGAAACGTGACAGTAGCATCTTATACCCATTGGTTGGATCATTA TCATTATATATGCATTCCTGTGCTGAGATCTCTACATATGAATAGGAGTA AGTTTCTCTGCTCTCCTGGCACTGCTTGTTTGCTGTAGACCTGCAGCTAC TGTTCTGAGACATGTAGCTACTGTGCTGAGATCATTATCATTATCATTCA GCTCAATTACTGAGACGTGACTAGGACCTAGTGTCCCTCGCATAGCTCCA TCACAAAATGGTTTCTACAGTAAGAACGATGAACACTCAAACTAGCTCAA TGTCTAGCGGCCTTGGCTATAAATCTTGTCACTAAGCATGCTAACCTTGT CGTACTCTATATTTCATGCTATAGACCTGAACTAGTGATACCTGAACTCC ATGCTAACCTTGTCGTACTCTATACTTCTTTTATGCTTACCGATCTGAAC TCCTATGAACCAGATGGTCCATGCATGAGCATATAGGAGTATATAATAGT GTATATTGTCTCTAGCATGCATGAGCCAGATGGTCCATGCTTGTAGTAAT TCATTTATTTTGACTGGGGAAATTCTGAAAATTACTTCGAGATGTGTACT TCTTAATTCACCCCTGCCATGTTCTTTCCATTGCTGCATGTCCTAAATCC GAGACAGTAGATAGGTCCTTTATTTATTACTGGGCATATATATCCGTTCC AAAACACCACTACAGTTTGCCATGATATATCTCCTGTATTTAAGTTTGTC ATTCAAGTACAATTTACAATTCAGTCATGATGTTCAACTTGTGCTTTGTG CTATCGCTTGTTTCTTTTCCTAAACTAGTATTAGAGTATTATATTTAGAC TTTATGCTGTTATATTTCCTGAACTAATTTCTTAAAATGATGCAGGGACA CTATGGTGAACAATCAGGATGTTATTGTCCTTAGTGATGATGATGAGCAC ATGAGCAGTGGAGACGATGGTGACAACAACTACATCAGTAGCGACGACGG CGACGACAACATGAGCAGTGGAGACGATGGCGACAACAACTACAGCAGTA GCGACGACGATGACGACAACATGAGCAGTGGAGACGATGGCAACAACACC TACATCAGTAGTGATGACGACGACAACATGAGCAGTGGAGACGATGGCGA CAACAACTTCAGCAGTAGCGACGATGATGAACATTTAAGTAGTAGTTGGA TTGTTAATATCTAGTATGTACTATGGCTGGCAAGCATCTTTTGGACTGTT AAGATGGACCGTTAAGCCCCTTTTGGACTGTTAAGATGGATTGTAAATAT GTAGCTAAGTATGTAGTGTGGCTGTCATAGCCTCTTTTGGACTGTTGGTA TTAAGATGGATTGTAAATATGTAGCTAAGTAAGTATGACTGTTAGAGCTT CTTTTGAACTGTTAAGCTAAGTAAGTATGGTTGTTAGTGCTTCTTCTGAA CTGTTAAGTTAGCTGTTATAACTAGACCGTTGTTATAACTAGACTTGTTC TAGTGATATATTAAGTTAGTTGTTATAACTAGACTGTTAGTTATTTCTCA TGTATTGATTATAGCAGGCATTTTTAAAAGTGCCTTAAAAGATCATACCT TTGCTGGCACTATTGAAAAATGCCTTAAATAATCTAATTTTCCTGGCACT TCAAAATATGCCCTAGAATATCTGTTTTTTCATGGCACTCTCCAAAAATG CCTTTAAATATCTTATTTTTCCTGGCACTTTCTGAAAATGCCACAAAAGA TAGTTTTTTCAGGCAATTTACAAAAATGCCTCTAACATAGTGCCTGGAAT AATCTACCGTGACATAGTGATATTTAGATCCAGAACATGTGACTATCTGT TACCTACTATTTAAAATTGATTAAAGTTTTAGGATTGTCCTAAGCAAAAA TTGTCTGATTTGATGTAGTGTATAGAAAAATATGCTGCGTACAATCTACA ACATCAAAATATATATAGTGCGGAAATACATTCTGCGATGAATGTAATGA CACTAGATTGACATATATATTTTTGATATACTACTCTTCCATAAACTTGG ACAAACTTATAGTTTGATTTAGGACAATACTAGCTAGAATATCAACTAAT TTAATTGGAATGGTGGGAGTAGGGAGAAAAGACAAATTTCTACCCTAATT TTGAGGTTTCTATGTCTTAAAATACTTCAATCAAGTTGACATCACCTAAC GTTTGAACCTATCCTTTGAATTGAATATCTGAAATAATATACAAATAATT AAGACTGACTCGACACTACAGCACAACCAAGGCAAACTAAACAACACGAG GATCCATCTTCTGGTTTCCTACATCGACGGCATCCCATCATATATTTCTG GTCCACTAGCTAGTCTCGTGGATGCTGCATTTCCTCGCCTGATACACTAC CTTCCATTTCCTGGTCAGTATGCAGAATAAGCTCGTATGCGCCGCTTTGC TTCTCCTCCTCTCGTCGTCCTCGGCGGCGGCCGATTCCGGCGTCCGGTGC TTCCAATCCATCTTCAGCTTCGGCGACTCATTCGCCGACACGGGCAACAA CCCCGTCGTTTTCGAATGGTACTCCATCTTCGACCACGTCACGCGAGCTC CGTACGGCACCATCTTCTTCGGCCGCCCCACGGGCCGGAACGGCGACGGC CTGTTAGATAATCACGTGTCCTACACGTATTGGAATTGCAGTCCGAGTAG ATGTAGGTGTCGAGATACTATACGTATATGTATTAGACTAGGTTTAGCTA CCGAGTCGGTTGTCTAGTCTTGGCATATATATATGCGTGTATCCTAGCCT GTAAACACCACCGTGACCGTAAGTTGAGCAATACAAGAGAAAAAACAAGG CTCGACAAGAGCCTTTGGCCATCATATTGTTTTGCGTGTGCGTGCGTGAG TTGTACTAGCTTAGATCAAAAGAATCGATCGGCTAGCAGCACGTGCATCT CGGCGAAAGTTATCGGATACGTGTGTGTCGTCTCGTCGGAATTTCCTCGT CGGTGTCGTCGGAAAGTACTCGGCGGCAGGGGCTGTGCTAACAATTGGTA TCAGAGCCTCGCGGAGGATCTCCTGGTAACGGGAGGTCATGCCGGACAAG GAGCTAGGCGAGTATTCTGGTGCGTCTGCGGATGCGCCGGTGTCGATGCA GTATCCGCGGTACAGCCACGACAACTACACTGTCTGGGCGGTCCAGATGG AGTGGGCGTTAGAAGGCGCCAGACTCTGGGAGGCTGTCGATCCAGGCGGC GACGAGTTCAAGAAGGGCGCGTCGAAGTACCACCTAGACCGACTAGCACT CACGGCCATCTGCTCGGTGGTGCCAACGGATCTGATGCAACACCTGATCT CGAAAAAATCTGTAAAGGAGGTGTGGGATACGCTCAAGACGCTAAATCTT GGGCACGAGCGCGTCCGCGAGGCGACCCTGCAAACCTTGCAGAAGAAGTA CGAGAATCTGGAGATGGGAGAAGATGAGACGCTAGACGCCTTTGCTTCAA GGGTCGCTACACTGGTCAATGGGATTCGCGGACTTGGCGAGAAGCTGGAT GAGATCTCTATTGTGAGGCGTTTCCTCCGTGTGGCGCCGCCGCGTTACTC ACCCGTTGTCTCGGCGATCGAGCAATGCGTTGATCTCAAGACTCTCACGA TGGATGATCTAGTTGGACGGTTCAAGGCACACGATGAGCGGATGAAGATC ACCTATGGCGACGCGAAAGTGGATGAGCATCTCATGCTTATGGCTCGAGC GTTGTTCGCTAAGGAGAAGAAGGGCGATAAAGCATCCGGCAGCAGGAGTG ATAGAGAAGATTCTCGCCCAGCGAAAAAGCATATCGCAGGGGAGGACGAG GACGAGGCTCCGCCACGGAGGAAGTTTGACATCAAGAAAGTAAGATGTCA TAAGTGCGGCGAGCTCGGACACTTCAAGAAGGATTGCAAGAAATCGTCGA AGGAGAGGGCTCTCATCGCCCAGGAAGGAGATGATGATGGACCGATGATG CTGATGCTCGAAGTAACTGAGCTAAAGGATGAGGAGGATCCTCCATCACC GGGTACGGAGATTGTGGCGCAAGTGGATCACGATCTACCGTGTGTGGATC ACGAGCAACGGAGTGTCCGGTTTCTACGTGAAGCCACGTTTGAGGCGAGT GAAGCTTCAGAATCTGATCATGGCGGTCTATGCGTTGAAATTTCGCCTGC AACTCCGTCCGGCAATAAGTTTTTCATGCTTGTGGTGGATGATCATAGTA AATACATGTGGATTGTGTTGCTAAAAAGTAAGGGTCAAGCTCAACAAGCA TTTGAGAATATCAAGGAAGCCGGAGAGTTTAAGGTGGAGGCGAAGATAAG AGCTCTACGCATTGATCAGGAAGGCGAGCTGCATCAAACCGTGTTGACCA TGGCACGGAGGATGATGAAGAGTAAAGGTTTGCCAGGAAACTTCTGGGGT GAGGCAGTCAATACGGCTGTGTATTTGCTGAACATGGAACCAACTGAGAG TGGAGTTGGTATGACTCCGTATGAAGCATGGTACGGACGGAAGCCCTCGG TTGATCATCTTCGTACTTTTGGATGTGTGGCGCATAAGGTGAATCAGAGT ACTCCAATGATCATGACAGGCTATGAAGGCTCGAAGGGATACCGTTTGTG CAACCCATATACCAATAAGGTGGTTTTCACGGACGACGTAGTCTTTGAGG AAGAGAAATCATGGAATTGGGGCTCCAAGGAACCGGAATATTCATCTGTT CACATCACGTGGGATCTTGAGTATGAAGAAAATATGGATCAACCAAGCTT ATCTTTGTCAGCAAATTCAGACCCAGAAGAGATTGAAGGTCTAGGGGGTG CTCCAGGCGTGGACACCAGGCCAGAAGCACTAGGGATACTCCCAGAAGGA AAAGTGTCTGGAGAAAAGGCTATTCCGTGGTCAGAAAAAACAGAGCTAGT TGTGTTTAGCTTATCATCCGCTAATACAGGAGGTGATGATCCACGTGAAG AGCTTGGGGCAAAGGAGTGTCCAGAAGTGCAAGGGCCATGTGATGTGGTG GTGGGTCAAGAAATTGGCTCAGAAATAGGCATGCAGGATACGTTGCATGT AGAGCCATTGGCTCCAGGAGCTCTACATGGAGGCATACAAGGTTCAGAAA CTGGAGAAACAAGCGTGTTGTCGGACGCAGAAGAGTATGTCGTGATACCT CCGACTGCACTGGAGATGAGACGACTACGACCGATGCAAGCACGCATGAG AGACGTGCTGGACTACTATCCAAAGAAAGAATTTTGGACGGTAAATTATC TCGTGAAGATGGAATACGAAAATCAATGTTTGTTCATCAAGGAACCGGTG AAGACTGAAGGCACGGTCATGGATGACATCGACAAGGAGGACGCGGAAAA AAAGGGCGCGGGCGAGAAGAGTCGACGTGAAGCCATGGAGAAGCCGGCGA AAGCAATGTCGGTGACATGGGTACCAAGGAAGGGGACGGCGAAAGCAATT CCGAGGAAGACGTCGGCGAGGAGCAACCGGCGCATTTGGGATTCAGGTCG ATGTAAAGAAGCACATCGTGATTAGGGGGTGATTGTTAGATAATCACGTG TCCTACACGTATTGGAATTGCAGTCCGAGTAGGTGTAGGTGTCGAGGTAC TATACGTATATGTATTAGACTAGGTTTAGCTACCGAGTCGGTTGTCTAAT CTTGGCATATATATATGCGTGTATCCTAGCCTGTAAACACCACCGTGACC GTAAGTTGAGCAATACAAGAGAGAAAACAAGGCTCGACAAGAGCCTTTGG CCATCATATTGTTTTGCGTGTGCGTGCGTGAGTTGTACTAGCTTAGATCA AAAGAATCGATCGGCTAGCAGCACGTGCATCTCGGCGAAAGTTATCGGAT ACGTGTGTGTCGTCTCGTCGGAATTTCCTCGTCGGTGTCGTCGGAAAGTA CGTGAGTTGTACTAGCTTAGATCAAAAGAATCGATCGGCTAGCAGCACGT GCATCTCGGCGAAAGTTATCGGATACGTGTGTGTCGTCTCGTCGGAATTT CCTCGTCGGTGTCGTCGGAAAGTACTCGGCGGCAGGGGCTGTGCTAACAC GGCCGTATGATCATCGATTTCATCGGTAGTTGTTCCTCAATTTCTGTCCT AGCTCTGTCTTGCCGTTCACTGGATAACTCTAGGTTCTTTGTGGTGTGGG AGTAGCTGAAAACTTGGGTCTGCCGTATGTGCCGCCCACCCTGGCGTACA ACGGCAGCTTCCGTCAAGGGGCCAACTTCGCCGTCGGCGCTGCCACTACT ATCGTCGCCGGATTCTTCCACGAGCGGGGCATTCCCGGTGCCCCCAGCAA GTTCCCCCTAAACACCAGTTTAGACGTGCAGCTGGAGTGGTTCGAATCGA TGAAGCCCTCTTTGTGCCGGACAGCCCGAGGTTAGTACTTGGTTATGCAT CGGCCATGTCCATGCTTGATGAGAACTCAAATGATATGAGATCAATGCAT GCAGAGTGCAGGGAATTCTTCGGCAGATCCCTTTTCTTCGTGGGAGAGTT TGGGGTCAACGACTATCACTTCTCTTTCCAGAAGATAACAGTACAGGAAG TCAGGTCCTTTGTCCCACATGTGGTGGCGACCATCTCCAATGCCATCGAG GTAATCAATTAATCATGGTGATCAGGTCAGGTGATGTACTAGTATATTGA ATCATGCTAGTAAGTTTATTGCCAATCTCGTACGTACAGAGGCTGATCAC GAAGCATGACGCCAGGAGCCTGGTGGTTCCCGGCGTGATCCCGTCGGGCT GCTCGCCGCCGGTTCTGACCTGGTTCGCCGACGAGGCCCCACCAGCAGCG TACGACTCCAGGACCGGCTGCCTGAAAGCGTACAACGAGCTGGGGCTGTA CCACAACTCGCTGCTGCAGGCTGCCTTGGCCAAGCTCCGGGCCAAGCACC GGGGCGTCAGGATCGTCTACGCCGATTTCTTCGGCCCAATCATGGAGATG GTGGAGGCGCCTCACAAGTTTGGTCAGCGCTGTTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.