GrainGenes Sequence Report: CA484099
Sequence
CA484099
Contig
Ta.26455.1.A1_at NSFT03P2_Contig14708
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC345774
NCBI UniGene
Ta.26455
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001042016.1 Os01g0147900 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Clone Library
Wheat meiotic anther cDNA library
Tissue
Anther
Developmental Stage
Meiotic stages pre-meiosis-metaphase I
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE4301_C01_E01ZS Wheat meiotic anther cDNA library Triticum aestivum cDNA clone WHE4301_C01_E01, mRNA sequence.
Strain
lab_host E. coli DH10B
Clone
WHE4301_C01_E01
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: SK primer. Note: Vector: pSPORT1; Site_1: SalI; Site_2: NotI; Plants were grown in a glasshouse. Anther meiotic stage was determined by removing anthers from individual primary florets. One anther was sacrificed for microscopic staging , and if determined to be between (and including) meiotic stages pre-meiosis and metaphase I, the remaining two anthers were collected and pooled for library construction. The tissue, total RNA, and poly(A) RNA were prepared, cDNA synthesised, and directionally ligated into pSPORT1 by Tim Sutton in the P Langridge Lab at the Department of Plant Science, University of Adelaide, Waite Campus, Australia. Average insert size 1.5Kb. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: pSPORT1; Site_1: SalI; Site_2: NotI; Plants were grown in a glasshouse. Anther meiotic stage was determined by removing anthers from individual primary florets. One anther was sacrificed for microscopic staging, and if determined to be between (and including) meiotic stages pre-meiosis and metaphase I, the remaining two anthers were collected and pooled for library construction. The tissue, total RNA, and poly(A) RNA were prepared, cDNA synthesised, and directionally ligated into pSPORT1 by Tim Sutton in the P Langridge Lab at the Department of Plant Science, University of Adelaide, Waite Campus, Australia. Average insert size 1.5Kb. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
attgtcaaaaccctgaatgaaggacaggttccccctgcagatgttgttga
ggtcgttgtcagccctccttatgtcttcctaactgtggtcaagagcctgc
tgcgcccagagttccatgttgctgctcagaactgctgggtgaagaaggga
ggtgctttcactggtgaagtcagtgctgagatgctcgtcaaccttggtgt
tccctgggtcatccttggacactctgaaaggagagctctgctgggagaat
caaatgagtttgttggagacaaggttgcttatgcgctgtctcagggacta
aaggtcattgcatgtgttggtgagacccttgagcagagggaggctgggtc
aacaatggaagttgttgctgcacaaacaaaagcaattgctgagaagatca
gtgactggagcaacgtagttgttgcctatgaaccagtatgggccattgga
actggtaaagttgccac

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: CA484099
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