GrainGenes Sequence Report: CA014706

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Sequence

CA014706

External Databases

TIGR Gene Index

NCBI UniGene

DB Remark

Locus Source: Hordeum vulgare subsp. vulgare

UniGene title 'Transcribed locus, moderately similar to NP_001044975.1 Os01g0877500 [Oryza sativa (japonica cultivar-group)]'

Keyword

EST

Species

Hordeum vulgare subsp. vulgare

Cultivar

barke

Clone Library

Tissue

endosperm early

Developmental Stage

0-16 hours after imbibition

Data Source

genbank	Release 135, Apr 15 2003
genbank	Updated Nov 2006

Title

HT12B23r HT Hordeum vulgare subsp. vulgare cDNA clone HT12B23 5-PRIME, mRNA sequence.

Strain

lab_host XL10-Gold

vulgare

Clone

HT12B23

Probe

baak29d10

Remark

DB_xref: taxon:112509

Feature: source: mol_type = 'mRNA';

Locus Comment: Contact: Stein Nils; Molecular Markers Group, Department Genbank; Institute of Plant Genetics and Crop Plant Research (IPK); Corrensstr. 3, 06466, Gatersleben, Germany; Tel: 039482-5522; Fax: 039482-5595; Email: stein@ipk-gatersleben.de; Insert Length: 668 Std Error: 0.00; Plate: 12 row: B column: 23; Seq primer: M13rev.

Note: Vector: pBluescript SK+; Site_1: EcoRI (5'-end of cDNA); Site_2: XhoI (3'-end of cDNA); Due to a cloning artefact caused by the kit, in most cases the EcoRI site is NOT present, as well as the EcoRIadapter used for cloning. To excise the insert, restriction sites upstream EcoRI should be used (e.g. BamHI, SalI,PstI). NOTE: Also due to the cloning system used Blue/white selection for recombinats is not 100% reliable.

DNA

aggactgacgtggagggtgtcgctgcgggtcggcgacgaaggggcggatg
aggacgccggtggctgcggggtggagctcaacgtcgtcgaggaggatgtg
ctcagatcgcgatctgtgtattgtgatcagtgcagagtcgtaggatggag
tgggcacccggtgtgcggcaagcgctaccatttcatcatcgagaacgaca
gcatccagatggctggccgtcgccgcacctgctgcctccgctgcgggact
tccatggccgctgcagaatcaaggtgcctgttgtgcaacttcgacatgga
aggcgaggaactcgaggagtgcgggtacctgcatcttgatgactcctctc
acttgcttcacgcagttgtgcacgcaaacggctatgggcatcttctcagg
gtaaatggccgtgagggcgggtcgagacaccttaccggccgtgacataat
gagcttctgggatcgcctgtgcaaggtgctgcatgtgaggaaagtcactg
tcatggacatatccaagaagcacggaatggattacaggcttctgcatgcc
gtcacaagtgggcatccctggtatggtgagtggggatacaagttcggcgc
cggtagctttgctcatacctcagatacctaccaggaggcagttgatgagc
tctccggcatacacctgg


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