GrainGenes Sequence Report: BU970599
Sequence
BU970599
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC166046
NCBI UniGene
Hv.7400
DB Remark
Locus Source: Hordeum vulgare subsp. vulgare UniGene title 'Transcribed locus, moderately similar to NP_001041862.1 Os01g0118700 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Hordeum vulgare subsp. vulgare
Cultivar
barke
Clone Library
BC
Tissue
developing caryopsis
Developmental Stage
8-15 DAP (days after pollination)
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
HB15C03r BC Hordeum vulgare subsp. vulgare cDNA clone HB15C03 5-PRIME, mRNA sequence.
Strain
lab_host XL10-Gold vulgare
Clone
HB15C03
Probe
GBM1450
Remark
DB_xref: taxon:112509 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Stein Nils; Molecular Markers Group, Department Genbank; Institute of Plant Genetics and Crop Plant Research (IPK); Corrensstr. 3, 06466, Gatersleben, Germany; Tel: 039482-5522; Fax: 039482-5595; Email: stein@ipk-gatersleben.de; Insert Length: 398 Std Error: 0.00; Plate: 15 row: C column: 3; Seq primer: M13rev. Note: Vector: pBluescript SK+; Site_1: EcoRI (5'-end of cDNA); Site_2: XhoI (3'-end of cDNA); developing caryopsis , 8-15 DAP(days after pollination) Due to a cloning artefact caused by the kit, in most cases the EcoRI site is NOT present, as well as the EcoRIadapter used for cloning. To excise the insert, restriction sites upstream EcoRI should be used (e.g. BamHI, SalI,PstI). NOTE: Also due to the cloning system used Blue/white selection for recombinats is not 100% reliable. Note: Vector: pBluescript SK+; Site_1: EcoRI (5'-end of cDNA); Site_2: XhoI (3'-end of cDNA); developing caryopsis, 8-15 DAP(days after pollination) Due to a cloning artefact caused by the kit, in most cases the EcoRI site is NOT present, as well as the EcoRIadapter used for cloning. To excise the insert, restriction sites upstream EcoRI should be used (e.g. BamHI, SalI,PstI). NOTE: Also due to the cloning system used Blue/white selection for recombinats is not 100% reliable.
DNA
cggcacgaggctcaagtacatggcatactcgtgcggcacggaggagagca
cgctggtggacaccctggggcgcgaccacccggcggtcaaggacccggag
tcgatccaccggagcgggtggaacaaggtggcggagttctacctcggcaa
gcaggacgtcaagctcgacctccagaggttcgagcccgtgctcctcaagg
ccatggccatgctcagagagtagctacgctccctccctcggatcgacctt
gcagccgactagcttagagcagtttcattccttctaatttattcctatta
atttacattttttttttgtgtgtgtgtggatggactgatcaataggttta
tacggtatatatgtgctccactggtcgatcggtcgacagagcaatacc
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BU970599
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||