GrainGenes Sequence Report: Ta.9628.2.S1_a_at
Sequence
BU100919
Contig
Ta.9628.2.S1_a_at Ta.9628.2.S1_at NSFT03P2_Contig3425
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC280523
NCBI UniGene
Ta.55452
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001064381.1 Os10g0339600 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Clone Library
Chinese Spring aluminum-stressed root tip cDNA library
Tissue
Root tip at 1.0 to 1.5 mm stage
Developmental Stage
Seedling
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE3359_D10_G19ZS Chinese Spring aluminum-stressed root tip cDNA library Triticum aestivum cDNA clone WHE3359_D10_G19, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE3359_D10_G19
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown for four days under hydroponic conditions with 1ppm aluminum, root tips were excised and snap frozen, and total RNA was prepared at University of Missouri in the JP Gustafson lab (Ross). Poly(A) RNA was purified, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript SK(-) phagemids in the TJ Close lab (Chin) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
cctttcggtcatggggctaagacggcaaaagtgaattacggagctaatgg
ctgggttagtcaccaagtcacagacttgtgggcaaaaacatcaccggatg
ctggtgatccttcatgggctctatggccaatgggtgggccatggcttgct
acacacctgtgggaacactacagttttacaatggacagagaatttttgga
gagaacagcgtatccacttttggaaggatctgcctcctttctgttgtcct
ggttgattgaaggccaagaaggctatctggagaccaatccttctacttcc
ccagagcattattttattgctgccgatggcaagaaagcatctgtgagcta
ttcaacaaccatggacatgtcaattattagagaagtattctcagctgttc
ttctgtctgctgatattttaggaaaatccagcactgatgtggttcagagg
ataaaagcggcacttccaaggctcccaccgataaaaattggtagagatgg
tacaatcatggaatgggcacaagattttaaggatcccgagcctcagcaca
ggcatgtatctcatctgtttggtctttatcctggacataccatgacactt
gagcaaacacctgacctctgcaaagctgttgccaatactctttataaa
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: Ta.9628.2.S1_a_at
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||