Query (optional)   in Class  

GrainGenes Sequence Report: BQ842141

[Submit comment/correction]

Sequence
BQ842141
Contig
TaAffx.128530.1.S1_at
NSFT03P2_Contig9929
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
NCBI UniGene
Ta.32417
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_001065802.1 Os11g0157600 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Brevor
Clone Library
Wheat dormant embryo cDNA library
Tissue
Seed embryo
Developmental Stage
Mature seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE2989_D07_H13ZS Wheat dormant embryo cDNA library Triticum aestivum cDNA clone WHE2989_D07_H13, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE2989_D07_H13
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: SK primer.
Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown to seed maturity under conditions favoring seed dormancy (L. Dohery at K. Walker_Simmons lab, Washington State University, Pullman, WA). Embryos were cut from mature dormant seed (Doherty). Total RNA was prepared from these embryos, polyA was purified, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab at the University of California, Riverside (Chin, Fenton). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
gagccccgctctccggaatcgacctgctctccaggatcgtcgcggcagac
gagtgcaagaacatccccgttataaggtactgctcctggatatttggaac
taaatgcaaatggatttggtggtctgcttgggtcccgtgtcgtctactgt
tagtcggtgtccgtctctgctctcagttgtaactgaattaccgttgtcgt
tgtcggattccattcgagtatcgctatggtgatgtcatcccaagattcca
ttggcacagtgctaaagtgcatgcagaatggggcagtggacttccttgtg
aagccagtgaggaagaatgaattgcgtaatttatggcaacatgtgtggag
gcggcactcgatgaatagccaattaaatgcatcagaaaacaatgcagcca
gcaaccatataagtgtgaattctggtagcgggtcgaagacaggagaaaac
agcgacgaggaaagtgatgctcagagctctggaagcaaaagggagactga
aattcagattgttgagaaattaccggagattgtgacacataatggggcaa
gctcatccagagaactaaaaatacagaatgggccttttgatagaataaac
acaaaggcacttgcattagagggtactgatgatgctccaagtggaaatgc
atgtggcaccagtaagccgcaagtgttttcagctgagaagaatgtgcatt
ccaagtatcttcatggcattacttctgcaaaggttgctggacagataatg
gac

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.