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GrainGenes Sequence Report: Ta.7771.1.A1_s_at

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Sequence
BQ788885
Contig
Ta.12015.1.S1_at
Ta.7771.1.A1_s_at
NSFT03P2_Contig12074
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC317839
NCBI UniGene
Ta.46933
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_565656.1 aldo/keto reductase family protein [Arabidopsis thaliana]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Clone Library
Wheat CS whole plant cDNA library
Tissue
Roots, leaves, crown, stem and sheath
Developmental Stage
Adult
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE4154_H11_P22ZS Wheat CS whole plant cDNA library Triticum aestivum cDNA clone WHE4154_H11_P22, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE4154_H11_P22
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: SK primer.
Note: Vector: Lambda Uni-ZAP XR, excised phagemid pBluescript SK(-); Site_1: EcoRI; Site_2: XhoI; Plant tissues from wheat cv. CS grown to full tillering stage in greenhouse were collected at University of California, Davis (Jan Dvorak's lab, K. Deal and E. Akhunov). Total RNA was prepared from leaves (young leaf and third leaf), whole roots, crown, steam and sheath tissues, and then equal quantities of RNA were pooled from the these samples. PolyA was purified from the pooled RNA, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript SK(-) phagemids in J. Dvorak's lab (E. Akhunov, J. Dvorak) at the University of California, Davis. Colony plating, plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
tcggcacgaggaaaaatggcagagctttgtgagcttaccggagtcaagct
tatcacgtatggcacggtgatgggtggcctattgtccgagaagttcctcg
acaccaacatcaacataccttttgctggacctcctctgaataccccatcc
ctgcagaagtataagaggatgatcgacgcttggggtggctggagcctgtt
ccaggctctgctccagaccttgaagaaggtgtcactgaaacacggcatcc
cgatctcaactgtcgctgtacgatacatactgaaccagacatcggtggct
ggttcaatggtgggcgtgaggctgggtctgtcggagcacatcagggacac
caacgccatcctgtcgctgctgctggacgaggaggacatgggcagcatca
ccgaggcgtcgcagcggggcaggaacctgatggaggtcatcggagactgc
ggcgacgagtacagagcctagtgactttcacatggccggggatcgagtct
cgatcctcgatccccccagcatgtgctcccacaacgatacataacatacc
accttaacaaatgagagtgacaatcatggagaggaaaaactttcagtggc
atggagacagatagacagagaga

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