Query (optional)   in Class  

GrainGenes Sequence Report: BQ167419

[Submit comment/correction]

Sequence
BQ167419
Contig
Ta.22939.1.S1_at
Ta.22939.1.S1_x_at
NSFT03P2_Contig13425
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC314903
wEST map position
BQ167419
NCBI UniGene
Ta.22939
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_001046892.1 Os02g0496900 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
2BL
2DL
7BS
Clone Library
Cheyenne wheat endosperm cDNA library
Wheat endosperm cDNA library
Tissue
Cheyenne endosperm
Endosperm
Developmental Stage
5 -30 days post anthesis seed
5 to 30 days post anthesis seed
Data Source
genbankRelease 136, Jun 15 2003
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0063_F09_K17ZK Cheyenne wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0063_F09_K17, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0063_F09_K17
Probe
WHE0063_F09_K17
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: Stratagene's KS primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, Cheyenne endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA
gattcggcacgagcctggctgccatctcgcggtcctcggtggcggcgcac
ggccgcgaggcggcggcggtggcggggaagctgctgcggagcacggggaa
ggcggcgtggatcgccgggacgaccttccttgtgctggtcgtgccgctca
tcatcgagatggaccgggagcagcagatggtcgacctcgacctccagcag
caggctcttctcggctcgccgccgcccctcgccaaataaatccctcctct
ttcgtccgtctttgttgcctgccgctgctgctgatgcggtcgcatttcgt
tttgctagtatcataagttgtcgagaattttatcactagtctgttttggg
ggaaaaagatcataccttgttgtgactgctcctgctcggct

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.