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GrainGenes Sequence Report: BQ167019

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Sequence	BQ167019
Contig	Ta.3407.1.S1_at NSFT03P2_Contig14068
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC331730
wEST map position	BQ167019
NCBI UniGene	Ta.54532
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001056479.1 Os05g0589000 [Oryza sativa (japonica cultivar-group)]'
Keyword	EST
Species	Triticum aestivum
Cultivar	Chinese Spring
Chromosome	1AL 1BL 1DL
Clone Library	Wheat 5-15 DAP spike cDNA library
Tissue	Spike
Developmental Stage	Adult plant
Data Source	genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title	WHE0948_D12_H24ZT Wheat 5-15 DAP spike cDNA library Triticum aestivum cDNA clone WHE0948_D12_H24, mRNA sequence.
Strain	lab_host E. coli SOLR
Clone	WHE0948_D12_H24
Probe	WHE0948_D12_H24
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 5, 10 and 15 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors ). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 5, 10 and 15 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA	gaccaaccattctcattgtcaagcctaccactccaacatgggaataaagc gcacaaccacgtacacgtcgtgtttcgagtcccgacttccgagcgttata gtttgaaatcaccagggacggtcgatgctagttactagtagtagtagtag atagtatatgtttttcccctctccgccacaggcctcgcatgccagattcc tccgtgtctcgctcgctacctgagccaccaccgctggaccatggagatgg gtgtctggaggaacggtgcgtagcggtcgatgtacgggttgacggtccgc ccgatcttggcccacgcgctctggtggtagctggatgtcacgggcgcgcg gtacatcatcttcagcacgttccagtacatgaatgtctggnatgaaattg cgcctccacgagaacagtgatatgatcagaaggaaccccaaggcaagttc agcattcgagctaaggaggctgagcgtgggntttgtttgtctccacccaa aggcaaggctcttccaagtatcccctgtagaaagatgagcgggaaaagtt acgccttaggaatctggcaacatgatcaagcgcccagcagaagacaggta gcgcagcaatctttaagtgcagctgagatgtgacgagc

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