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GrainGenes Sequence Report: BM100373

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Sequence
BM100373
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC156448
NCBI UniGene
Hv.3688
DB Remark
Locus Source: Hordeum vulgare subsp. vulgare
UniGene title 'Transcribed locus, weakly similar to NP_001049747.1 Os03g0282300 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Hordeum vulgare subsp. vulgare
Cultivar
Optic
Clone Library
maternal, 4 DPA, no treatment, cv Optic, EBma01
Tissue
maternal
Developmental Stage
4 DPA
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
EBma01_SQ005_A10_R maternal, 4 DPA, no treatment, cv Optic, EBma01 Hordeum vulgare subsp. vulgare cDNA clone EBma01_SQ005_A10 5', mRNA sequence.
Strain
lab_host DH10B
vulgare
Clone
EBma01_SQ005_A10
Probe
bastl14F0412
Remark
DB_xref: taxon:112509
Feature: source: mol_type = 'mRNA';
Locus Comment: On Nov 21, 2001 this sequence version replaced gi:17031441.; Contact: Waugh R, Marshall DF; Genome Dynamics/Computational Biology; Scottish Crop Research Institute; Invergowrie, Dundee, DD2 5DA, Scotland, UK; Tel: 00 44 1382 562731; Fax: 00 44 1382 562426; Email: est@scri.sari.ac.uk; All sequence has a Phred quality score of 20 or over; Seq primer: M13 reverse.
Note: Vector: pSPORT1; Site_1: Sal I; Site_2: Not I; Non-normalised library, directionally cloned into pSPORT1. Derived from maternal tissue dissected from developing grains (4 days post anthesis) in glasshouse grown barley plants. Developed as part of the barley transcriptome resources of BBSRC/SEERAD funded cereal IGF (Investigating Gene Function) project.
DNA
ttctaccgactaatacatagtggcattttgattcagccgccgtcgcttct
gttagcccaatcaagaagtgtttgctgaccataccctcttcctacactgg
tttgtttgttgcgttcttcctcaggagatatgctgcagcgtagtatctac
aggctgatataaatgatacacatgttacactgatgagacgagcgtcatcg
gtgggctgcatctttggatcctggttggcataattagctgaagctggcat
gtcaacatggtggcgaaattccatttctcgccaaatcgaagctaaacgag
agatggcttgaagctacttgcagaagcgtccccctctctctctctctaca
cctgggcttcacctatttgcggttgcatggtagggcgccctgtattaaag
tgacttgtcttcactataatttgcctagtcgttggatctggaaaagcaag
cagatgggatacgtagtgctgctgcatagtgggatacggtacggataccc
acccggtttggatgtggtttaattaagacttgttgctgtcttcaaacctg
acttttttatctactgtttattaatgggtgtcaccaccgccgggcaattt
gcatcccaataaaagtccgcagtgtgtttggcattgcccctttttttcta
aatggtggagtg

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