GrainGenes Sequence Report: BG608070
Sequence
BG608070
Contig
TaAffx.82113.1.S1_at TaAffx.82113.1.S1_x_at NSFT03P2_Contig2144
External Databases
Data at GenBank Data at EMBL Data at DDBJ
DB Remark
Locus Source: Triticum monococcum
Keyword
EST
Species
Triticum monococcum
Cultivar
DV92
Clone Library
Triticum monococcum early reproductive apex cDNA library
Tissue
Early reproductive apex
Developmental Stage
Seven week-old plants
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE2496_E07_I14ZS Triticum monococcum early reproductive apex cDNA library Triticum monococcum cDNA clone WHE2496_E07_I14, mRNA sequence.
Strain
lab_host E. coli XLOLR
Clone
WHE2496_E07_I14
Remark
DB_xref: taxon:4568 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova , J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova, J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology
TaAffx.82113.1.S1_at 611 WHE2AFFY
[ Show all 47 ]
DNA
gccgcacaccgctccgttccaccccaccagccaccgccgcccaccgccca
agattcgcccgtcccggcgggactgttggatcgatggccgccatgaaggt
cgtgctgaagctggacctgcacgacgacaggcagaagcagaaggccatca
aggtcgtctccactctccacggcatcgaccagatcgccgtggacaccgag
gacgacaagatgacggtggtcggcaccgtcgaccccgtccacgtcgtcgg
caagctgcgcagcaagctcttccgcacggcgcagatcgtctccgtcggcc
cggccaaggacgagaagaaggacggcgccgctaagaaggaacccatccct
gtgtacgcgccgtggtacccgccgccgccgccgccgccgccgtaccacta
ccacccgcacccgtactaccacaaccacagcgccgaggaggaccccagct
cctgcgtcatctgctgatcgagttgcacattccgtagccggcccgccgat
cgatcagcgttccttcgccggtgatcgacggcgtgcggcatgtacctggc
cgtgtaaggcgtgtacgttgcgccggtgatccggcagccgtgcatctgc
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BG608070
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||