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GrainGenes Sequence Report: NSFT03P2_Contig12707

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Sequence	BG607570
Contig	Ta.6954.1.S1_a_at Ta.6954.1.S1_x_at Ta.6954.3.S1_a_at NSFT03P2_Contig12707
External Databases	Data at GenBank Data at EMBL Data at DDBJ
wEST map position	BG607570
DB Remark	Locus Source: Triticum monococcum
Keyword	EST
Species	Triticum monococcum
Cultivar	DV92
Chromosome	3AL 3BL 3DL
Clone Library	Triticum monococcum early reproductive apex cDNA library
Tissue	Early reproductive apex
Developmental Stage	Seven week-old plants
Data Source	genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title	WHE2480_E09_I18ZS Triticum monococcum early reproductive apex cDNA library Triticum monococcum cDNA clone WHE2480_E09_I18, mRNA sequence.
Strain	lab_host E. coli XLOLR
Clone	WHE2480_E09_I18
Probe	WHE2480_E09_I18
Remark	DB_xref: taxon:4568 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova , J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova, J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology	Ta.6954.1.S1_a_at 811 WHE2AFFY [ Show all 17 ]
DNA	acctgtgcccaaccgatcaggccaacgaactacgcttggattgcctggag gacgagatcgcttcgctggagaaagaattctcaggggattaccaccactg gattggtttctgccacaatgatctacagtatggcaacatcatgatggatg aggagaccaacatgctgaccatcattgactatgagtatgcaagcttcaac ccagttgcatatgacatcgctaaccatttctgcgagatggcggcagacta ccattcggaaaagcctcatatactggactacagtaaatatccagatatcg atgagcagaggcgtttcgtgaagacttacctgagcacttctcgcgaggaa cctgaagtggaggaaggtggagaatctgctccggagcgtggagaagtaca cgctcgcgagtcatctggtttggggactctggggaataatatcggatcgt gtcaacgacatcgacttc

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