GrainGenes Sequence Report: BG607545
Sequence
BG607545
Contig
TaAffx.599.1.A1_s_at TaAffx.599.2.A1_at NSFT03P2_Contig11886
External Databases
Data at GenBank Data at EMBL Data at DDBJ
wEST map position
BG607545
DB Remark
Locus Source: Triticum monococcum
Keyword
EST
Species
Triticum monococcum
Cultivar
DV92
Chromosome
2AL 2BL
Clone Library
Triticum monococcum early reproductive apex cDNA library
Tissue
Early reproductive apex
Developmental Stage
Seven week-old plants
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE2480_C04_E08ZS Triticum monococcum early reproductive apex cDNA library Triticum monococcum cDNA clone WHE2480_C04_E08, mRNA sequence.
Strain
lab_host E. coli XLOLR
Clone
WHE2480_C04_E08
Probe
WHE2480_C04_E08
Remark
DB_xref: taxon:4568 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova , J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova, J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology
TaAffx.599.2.A1_at 1092 WHE2AFFY
[ Show all 10 ]
DNA
gatcacattgttggtctagaagctgagaggtggattttcaaatctggttt
tctccagtggctcatagttttgatacttggaacctattttaaggtcggag
catcctatatagcactcatctggcttgtttcgcctgcctttgcatatggc
cttatggaagcaacactatctcctctaaggtcacctaaacatcttaaggt
tgttacattggtcctggctttagctgtgccagttgtgtcatccgctggtt
tggttattcgcctggttgatgtcaattgatactaagtcatctactcgttg
gtcgctggcaatcaataaacaggaaattgatgacttcactattcatgtgg
actcgaataagttggttcatctgggtggtaagagtgaggtcgatggatgg
catacaatccgctttgcaggtggcaagagctcaccaacaaaattcgagtt
aacccttttctggtcaactaatggaacacatgcatctgcaaaagaaacta
aagcagaagacttttctccttttggtaaactaagaacggatgtgaatagg
gttacaccaatggttga
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BG607545
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||