Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: NSFT03P2_Contig15482

[Submit comment/correction]

Sequence	BG607203
Contig	Ta.4841.1.S1_at NSFT03P2_Contig15482
External Databases	Data at GenBank Data at EMBL Data at DDBJ
wEST map position	BG607203
DB Remark	Locus Source: Triticum monococcum
Keyword	EST
Species	Triticum monococcum
Cultivar	DV92
Chromosome	2AS 2BS 2DS
Clone Library	Triticum monococcum early reproductive apex cDNA library
Tissue	Early reproductive apex
Developmental Stage	Seven week-old plants
Data Source	genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title	WHE2472_F03_K06ZS Triticum monococcum early reproductive apex cDNA library Triticum monococcum cDNA clone WHE2472_F03_K06, mRNA sequence.
Strain	lab_host E. coli XLOLR
Clone	WHE2472_F03_K06
Probe	WHE2472_F03_K06
Remark	DB_xref: taxon:4568 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova , J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova, J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology	Ta.4841.1.S1_at 1090 WHE2AFFY Ta.4841.1.S1_at 174 WHE2AFFY
DNA	tcaagctgcccaaccattcttcttgttagctgggcccaatgtgatcgaat cagaggaacatgtcatgaagatggccaaacacatcaaagccatcacaacc aagcttggggtgcctcttgtgttcaaatcaagctttgataaagcaaaccg tacatcgtcgaaatccttccgcggtcctggtctggaacaaggcctaaaga tccttgaaaaggtgaaggctgcatatgaccttccagtggtcaccgacgtg catgaaagctgccagtgcgaagctgttggaagagttgctgatattataca gattccagctttcctctgtcgccagactgaccttctagtggctgcggcta agactgggaaaattatcaatatcaagaaaggacaattctgtgccccgtct gttatggccaactctgcggagaaaattagacttgctggaaatcaaaatgt gatggtctgtgagcgaggcaccatgtttggctacaatgatctaattgttg atccaaggaactttgagtggctgagggaaacaaattgcccagttgtagct gacgtaacacatgctctacaacaaccagctgggaaaaagcttg

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.