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GrainGenes Sequence Report: BE604046

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Sequence
BE604046
Contig
NSFT03P2_Contig18694
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC279430
NCBI UniGene
Ta.39177
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_178585.1 LHCB2.1 (Photosystem II light harvesting complex gene 2.1); chlorophyll binding [Arabidopsis thaliana]'
Keyword
EST
Germplasm
TAM W-101
Species
Triticum aestivum
Cultivar
TAM W101
TAM W-101
Clone Library
Wheat drought stressed leaf cDNA library
Tissue
Leaf
Developmental Stage
Full tillering stage
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE1401-1404_O03_O03ZS Wheat drought stressed leaf cDNA library Triticum aestivum cDNA clone WHE1401-1404_O03_O03, mRNA sequence.
Other Name
WHE1401-1404_O03_O03ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA027E1X
Clone
WHE1401-1404_O03_O03
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were given a gradual stress down to 65% and 78% RWC at Texas Tech University (D. Zhang in HT Nguyen lab). Total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close), at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
agccccagccaccagcgaaatggccgcgtcggcgctgcaccagacgacca
gcttcctcggcaccgccccgcgccgcgatgacctcgtccgcagcgtcggc
gacttcggcggccgcatcaccatgcgccggaccgtcaagagcgcgcccca
gagcatctggtacggcccagaccgtcccaagtacctgggcccgttctccg
agcagaccccgtcgtacctgaccggcgagttccccggcgactacgggtgg
gacaccgccggattgtctgctgaccccgagacgttcgccaagaacaggga
gctggaggtgatccactcgcggtgggcgatgctcggcgccctggggtgcg
tgttcccggagatcctgtccaagaacggcatcaagttcggcgaggccgtg
tggttcaaggcc

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