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GrainGenes Sequence Report: BE585781

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Sequence
BE585781
Contig
NSFT03P2_Contig4940
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC362131
wEST map position
BE585781
DB Remark
Locus Source: Triticum aestivum (bread wheat)
Keyword
EST
Species
Triticum aestivum
Cultivar
Sumai3
Chromosome
1BL
1DL
Clone Library
KSU wheat Fusarium graminearum infected spike cDNA library
Tissue
Spike
Developmental Stage
Adult plant
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
Est#1pT7_B08_b8_061 KSU wheat Fusarium graminearum infected spike cDNA library Triticum aestivum cDNA clone Est#1pT7_B08_b8_061, mRNA sequence.
Strain
lab_host E. coli JM109
Clone
Est#1pT7_B08_b8_061
Probe
MAG2921
Est#1pT7_B08_b8_061
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: John Fellers; US Department of Agriculture, Agriculture Research Service, Plant; Science and Entomology Unit; Dept. of Plant Pathology, 4006 Throckmorton Hall, Kansas State; University, Manhattan, KS 66506, USA; Tel: 785-532-2367; Fax: 785-532-6167; Email: jpf@alfalfa.ksu.edu; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: T7.
Note: Vector: pGEM-T easy; Site_1: SacII; Site_2: SpeI; Plants were grown in the greenhouse. Spikes were sprayed with Fusarium graminearum (at what stage). Total RNA, and poly(A) RNA were prepared from infected spikes. cDNA was prepared using the SmartTM PCR cDNA synthesis kit from Clonetech. cDNA was cloned into the pGEM-T easy vector from Promega.
DNA Homology
Ta.25487.1.S1_at511WHE2AFFY
[ Show all 7 ]
DNA
gcggggtagagtcaatgttaattgacatttcaactttgcgagcggcaacc
aaggattttgcggagaacaacaaacttggtgaaggcggatttggccccgt
gttcaagggtactctcttgaacggcgatgagatcgctgtgaagagactct
ccaagagctcaacgcaaggggtggaggagctcaagaatgagctcgccttg
gttgcaaagctgaagcacaagaaccttgtaagactggtcggcgtctgctt
ggagcaacaagagaggctgctcatctatgagtttgttcctaaccgaagcc
tcgatctgatccttttcgatgaagagaaacgtcagcaactggattgggaa
acaaggtgcaagatcataaacggagtcgctcgaggcttgcagtacctcca
tgaagactctcagctcaaagtagtccatcgtgacctcaaagcgagcaatg
tcttgctagacatgaacatgaaccccaagatttcagattttggcctcgcc
aaaattttcgggagagaccagacacagggcgtgacgaaccgcatcgtcgg
cacacagtaagtagtaacatgtaagacagtaagttttccagcagtaggta
gctcactatgagctcttctcattgggtgtttagtggatacatggcgcccg
agtacgtgatgcgcggggactactctgcgaaatcagacacgttgagctgt
ggcgtattgcan

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