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GrainGenes Sequence Report: BE585643

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Sequence
BE585643
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC307052
NCBI UniGene
Ta.42669
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_001053753.1 Os04g0599700 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Sumai3
Clone Library
KSU wheat Fusarium graminearum infected spike cDNA library
Tissue
Spike
Developmental Stage
Adult plant
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
EST#5T7_G06_g6_040 KSU wheat Fusarium graminearum infected spike cDNA library Triticum aestivum cDNA clone EST#5T7_G06_g6_040, mRNA sequence.
Strain
lab_host E. coli JM109
Clone
EST#5T7_G06_g6_040
Probe
MAG2914
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: John Fellers; US Department of Agriculture, Agriculture Research Service, Plant; Science and Entomology Unit; Dept. of Plant Pathology, 4006 Throckmorton Hall, Kansas State; University, Manhattan, KS 66506, USA; Tel: 785-532-2367; Fax: 785-532-6167; Email: jpf@alfalfa.ksu.edu; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: T7.
Note: Vector: pGEM-T easy; Site_1: SacII; Site_2: SpeI; Plants were grown in the greenhouse. Spikes were sprayed with Fusarium graminearum (at what stage). Total RNA, and poly(A) RNA were prepared from infected spikes. cDNA was prepared using the SmartTM PCR cDNA synthesis kit from Clonetech. cDNA was cloned into the pGEM-T easy vector from Promega.
DNA
gcgggaataatggctgcttgtgctgcactgtccgaggggatcttgtaaag
atgcttctgaagctggtgaagcaaaagggtgacaagtttgatcatatcgt
cattgagacaacaggtcttgcaaagcctggtcctgttattgagacatttt
gttctgatgaattggtctcgaaatatgtgaaacttgatggtgttgttact
ttggttgattgtaagcatgccatgcaacatttgaatgaagtgaaagcaag
gtgggttgtgaacgaggcagtagaacaagttgcttatgcagaccggatta
tattgaacaagactgatttggttgatgacgcagaacttgaggttttgacc
aacaagatcaagctcataaatgggatggcgcaaatgaaaaaagcaaaatt
tggtgatgttgacatggattttgtgctaggaattggcggttatgaccttg
ataggatcgaggctgcagtccaattgaatgaaaacaaagagacaggaggg
cattgccacttgggacatgagcatggacaccatcatgaccatgtccatga
tgcagctgttactagtgtaagtattgtttcggagggactacttgatcttg
atgaggttaatgattggctggagagactggttgatgagaaaggcgaagac
ctgtacagattaaagggtgtcatatccgtcaacgagtcaactggacgctt
c

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