Query (optional)   in Class  

GrainGenes Sequence Report: BE585630

[Submit comment/correction]

Sequence
BE585630
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
NCBI UniGene
Ta.54424
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_001054788.1 Os05g0176100 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Sumai3
Clone Library
KSU wheat Fusarium graminearum infected spike cDNA library
Tissue
Spike
Developmental Stage
Adult plant
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
EST#5T7_E11_e11_083 KSU wheat Fusarium graminearum infected spike cDNA library Triticum aestivum cDNA clone EST#5T7_E11_e11_083, mRNA sequence.
Strain
lab_host E. coli JM109
Clone
EST#5T7_E11_e11_083
Probe
MAG2912
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: John Fellers; US Department of Agriculture, Agriculture Research Service, Plant; Science and Entomology Unit; Dept. of Plant Pathology, 4006 Throckmorton Hall, Kansas State; University, Manhattan, KS 66506, USA; Tel: 785-532-2367; Fax: 785-532-6167; Email: jpf@alfalfa.ksu.edu; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: T7.
Note: Vector: pGEM-T easy; Site_1: SacII; Site_2: SpeI; Plants were grown in the greenhouse. Spikes were sprayed with Fusarium graminearum (at what stage). Total RNA, and poly(A) RNA were prepared from infected spikes. cDNA was prepared using the SmartTM PCR cDNA synthesis kit from Clonetech. cDNA was cloned into the pGEM-T easy vector from Promega.
DNA
gcggggggacaggatgctgtttcaacaggcaggccttgtatggctctgat
cctgtattaactgaggctgattaggaacctaacattgtgagttaagagct
gctgcgcgcggcggaaagaaaaagagcaagagctatatggataacaagaa
ccgtatgatgaacagaactgagtcttctgctaccatcttcaacatggaag
atataaaagagggtatagaaggttatgaggacgaaaggacaatgcttatc
tcccaaacaagatagaataaactatatggtcaatctactatatttactac
atccacctttatgactacaggaagcataccaccttgaacaaacccagcta
gtgtactaaaggaatccatccatggaatacactgagtatacaaggaccaa
accaaagtgggaataaaaatggcatgagtctacggaataatttgagaaga
tattgttactgttgcgatctatgggacacgaaagatacgaatttttctaa
tgtattttaattctaattgtttcatagtgcatataatataaatattattc
tctgatcttctcaatctgttctttttttgtccttttctatctgttatagt
catttagacaatataataattaatattttatagtgtcagctccgtctttt
ttttgcgttgatgtttatatttattatccacgatggcgtattcatattat
tatattataaggtatcttaatcgatttt

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.